Paragemmobacter aquarius: HYN69_17900
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Entry
HYN69_17900 CDS
T05407
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
geh
Paragemmobacter aquarius
Pathway
geh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYN69_17900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geh03400
]
HYN69_17900
Enzymes [BR:
geh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HYN69_17900
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HYN69_17900
DNA repair and recombination proteins [BR:
geh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYN69_17900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AWB50132
UniProt:
A0A2S0UQR9
LinkDB
All DBs
Position
3691790..3692656
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVETVRRGLVPVMEGQVITQAQVNRADLRWPFPDRMADRLTGAQVIGLRRRSKYI
LADLSTGETLLIHLGMSGRMLISAPDGARAALGEFHHVHPAPEKHDHVVFDMANGARVTF
NDARRFGAMDLMATAKAGAHPLLAGLGPEPLGNSFDDTYLAGKLKGKNTPIKAALLDQRL
IAGLGNIYVCETLYRSRIHPATLAGKLKPRQIAQMVPIIRDVLAEAIEAGGSSLRDYRQA
DGELGYFQHSFQVYGREGDPCLTQGCDAVVQRIVQSGRSSFFCPVCQR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaggttgaaaccgtccgccgtggacttgttccggtgatggagggg
caggtgatcacgcaagcgcaggtgaaccgcgccgatctgcgttggccctttcccgaccgg
atggccgaccggctgacgggggcgcaggtcatcggcttgcggcggcggtcaaagtatatt
ctggccgatctttccaccggcgagacactgctcatccatctgggcatgtcgggccggatg
ctgatttcggcgccggacggtgcgcgtgcggcgctgggcgagttccaccacgtccatccc
gcacccgaaaagcacgaccatgtggtcttcgacatggcgaacggggcgcgtgtcacattc
aacgacgcgcggcggttcggcgcgatggatctgatggcgacggcaaaggccggggcgcat
ccgcttttggcggggctgggaccggaacccttgggcaacagctttgacgacacctatctt
gcgggcaagctgaaggggaagaacacgccgatcaaggcggcgcttctcgaccagcggctg
atcgcgggcttgggcaacatctatgtttgcgaaacgctgtatcgttcgcgcatccatccc
gccacgcttgcgggaaagctgaaaccccgccagatcgcgcagatggtgcccatcatccgc
gacgtgctggccgaggcgatcgaggcgggcggatcatccttgcgcgattaccggcaggcc
gacggggaactgggctacttccagcacagttttcaggtctacggacgcgagggcgacccc
tgcctgacgcaaggctgcgacgcggttgtccagcgtatcgtgcaatcgggccggtcctcg
ttcttctgccccgtttgccagaggtga
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