Geitlerinema sp. PCC 7407: GEI7407_0207
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Entry
GEI7407_0207 CDS
T02366
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K03090
RNA polymerase sigma-B factor
Organism
gei
Geitlerinema sp. PCC 7407
Brite
KEGG Orthology (KO) [BR:
gei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gei03021
]
GEI7407_0207
Transcription machinery [BR:
gei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GEI7407_0207
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
HTH_38
HTH_Tnp_ISL3
HTH_3
HTH_AsnC-type
HTH_8
KORA
GntR
MarR_2
LacI
HTH_30
HTH_Crp_2
HTH_7
HTH_20
HTH_10
Fe_dep_repress
HTH_28
TnsD
YPEB_N
DUF3958
TPM_phosphatase
MarR
GerE
CENP-B_N
DUF1492
Thioredoxin_6
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
AFY64712
LinkDB
All DBs
Position
228306..229088
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AA seq
260 aa
AA seq
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MANQSSLRSQGLELLIAYHQNPSIAVRNRLVRLNAGLVRKIAHRVSHQCAEPYEDLEQIG
YLGLIRAIERFDPTQGCAFSSFAVPYIRGEMLHFLRDRASSVKVPRRWQDLYKEGQRVRT
QLSRDLGRQPSDFEIAETIGIAVGEWQEIKLSAKNRTPLSLDATVCQQADSQITLGETLP
DAHYQVLQRLEEDRQQLQRALNQLEDKTRAAIEFVFLNGMSRKEVAERIGVSPMTVTRRI
QRGVQQMVVFLQPQVLQTDP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcaatcgtcgctgcgctctcaaggtttggaactcctcattgcgtaccaccaa
aatccttccattgctgttcgcaatcggcttgtgcgcctcaatgcaggcctggttcgcaag
attgcccatcgtgtcagccatcagtgtgcagaaccctacgaagatctcgagcagattggc
tacttggggctgattcgcgcgattgagcgcttcgatccgactcagggctgtgctttcagc
tcgtttgctgtcccctatattcgcggcgaaatgctgcacttcctgcgcgatcgcgcgagc
tctgtgaaggtcccgcgtcgttggcaagacctgtataaagaaggacagcgggtgcggacg
cagctcagtcgcgatctgggccgccaaccgtctgattttgaaattgccgaaacgattggc
attgcggtgggcgagtggcaggaaatcaagctgtcggccaagaaccgcacgcctctgagc
ctcgatgcgacggtttgccagcaggctgactcccaaatcaccctgggggaaacgctgccg
gatgcgcactaccaggtgctgcaacgcctcgaagaagaccgccagcagcttcagcgtgct
ctcaatcagctcgaagacaaaacgcgagccgcgatcgagtttgtgtttctcaacggtatg
tctcgtaaagaagtggccgagcgcattggggttagcccgatgacggtgactcgtcgcatt
cagcgcggggttcagcagatggtggtatttctgcaaccgcaagttcttcagacagacccg
tag
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