Geitlerinema sp. PCC 7407: GEI7407_0815
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Entry
GEI7407_0815 CDS
T02366
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gei
Geitlerinema sp. PCC 7407
Brite
KEGG Orthology (KO) [BR:
gei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gei03016
]
GEI7407_0815
Enzymes [BR:
gei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GEI7407_0815
Transfer RNA biogenesis [BR:
gei03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GEI7407_0815
Prokaryotic type
GEI7407_0815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AFY65313
UniProt:
K9S542
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All DBs
Position
972231..973190
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AA seq
319 aa
AA seq
DB search
MQITFLGTSSGIPTRARNVSSVALRLPQRAEMWLFDCGEGTQHQILRSDLKVSQLTRIFV
THMHGDHVFGLMGLLASCGLAGNTARVDLYGPPRLEEYLRACERYSHTHLSYPVQVHMVE
PGLVYEDDEFRVFCTLLKHRVPAFGYRVEEKDRPGRFDAERAAALGIPFGPIYGQLKRGE
VVTLPDGRQVRGHDLCGPDQPGRKLAYCTDTVFCEEAIALAQDVDVLIHEATFSHRDAEM
AFQRLHSTSTMAAQVALAAQVQQLIMTHFSPRYAPGNAIQLEDLLAEARAIFPQTLMAHD
FLTYEIPRREPSTLTPARG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaatcacctttcttggtacgagttctgggatccctacccgcgcccgcaacgtctct
agcgtggctctccgcctgccccagcgggcggaaatgtggctgtttgactgcggcgaagga
actcagcaccaaattttgcgcagcgatctcaaggtcagccagctgacgcgcatttttgtc
acccacatgcacggcgatcatgtcttcgggctgatggggctgctggcaagctgcggcttg
gcgggcaacacagcgcgggtagacctctacgggccgccccgcctcgaggagtatttgcgg
gcctgcgagcgctattcccacacccatctgtcctacccggtgcaggtgcacatggtcgaa
cccggtctggtctatgaagatgatgaatttcgggtgttctgcacgctgctgaagcaccga
gtaccagcctttgggtatcgggtggaggagaaggaccggccgggacgctttgatgcggag
cgggctgcggcgctgggaattccgtttgggccgatctacggccagctgaagcggggtgag
gtggtgacgctgcccgatggacgccaggtgcgggggcacgatttgtgcgggccagatcag
ccaggtcgcaaactggcatactgcacggatacggtgttttgcgaggaggcgatcgcccta
gcccaggatgtcgatgtgctgatccatgaagccaccttctcccaccgagatgcggagatg
gcttttcagcggctgcattccacctcgaccatggcggcccaggtggccctagccgcccag
gtacagcagctgatcatgacccacttcagcccccgctatgcgcccggaaatgccattcag
ctcgaggacttgctggcggaggcgcgggcgatttttccccagactctcatggctcacgac
tttttgacctacgagattccgcgccgcgagccgtcgactttgacaccagcgcgcggctga
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