Geitlerinema sp. PCC 7407: GEI7407_0821
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Entry
GEI7407_0821 CDS
T02366
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
gei
Geitlerinema sp. PCC 7407
Brite
KEGG Orthology (KO) [BR:
gei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gei03021
]
GEI7407_0821
Transcription machinery [BR:
gei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GEI7407_0821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_Crp_2
KORA
HTH_24
HTH_23
MarR_2
HTH_17
HTH_8
HTH_3
HTH_AsnC-type
HTH_Tnp_ISL3
DUF134
HTH_30
Xre-like-HTH
HTH_31
HTH_1
AbiEi_4
REC104
Phage_CI_repr
HTH_37
RWP-RK
DUF374
HTH_50
GerE
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AFY65319
LinkDB
All DBs
Position
complement(978609..979391)
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AA seq
260 aa
AA seq
DB search
MTTTLSHDLKQKTLQLLKQYRDSPSPALRNELVQLNLGLVRKEAHHWINQCTENYEDLLQ
VGSMGLIRAIERFDITKGHAFSSFAIPYIRGEIQHYLRDKGSPVRIPRQWLTIQRQAVWV
IRDLQVKLNRLPTDLETAEALEITLDEWQQIKLACQNRSPLSLDAPVSDDDEGTASLGEM
LPDSHYRSFQLAQEDQLRLQQALVQLEKRTRDVLEFVFLYDLTQKEAAERLGISAVTVSR
RVKRGLQALKQMMAAGNEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgactacaactctctcgcatgacctgaagcagaagacacttcagcttttgaagcagtat
cgcgactcgccttcgcctgctctccgcaatgaacttgttcagctcaacctaggcttggtc
cggaaggaagctcatcactggatcaaccagtgcactgagaattatgaggatttgcttcag
gtgggctcgatggggctcattcgggcgatcgagcgttttgacataacgaaggggcatgcc
tttagttcgtttgcgattccctacattcgcggcgaaattcagcactatctgcgcgataag
gggtcaccggttcggattccgagacagtggttgacgattcagcgccaagcggtttgggtg
attcgcgatctgcaggtgaagctaaaccggctgccgaccgacttagaaacagccgaagcg
ctggagatcacgctggatgagtggcagcaaatcaagctagcttgccaaaaccgatctccg
ctgagcctagatgcaccggtgtccgatgatgacgagggcacagccagtctgggggaaatg
ctgccggatagtcactatcgcagcttccagctagcccaggaagatcagctgcggctacag
caggcgctggtgcagcttgagaagcgcactcgcgatgtgcttgagtttgtatttctctat
gatttgacgcagaaggaagcggcggagcgcttgggcattagtgctgtgacggtatcgcgc
cgagtcaagcgaggcctacaggctctcaagcagatgatggctgctggcaatgaggcgtcc
tga
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