Geitlerinema sp. PCC 7407: GEI7407_0988
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Entry
GEI7407_0988 CDS
T02366
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gei
Geitlerinema sp. PCC 7407
Brite
KEGG Orthology (KO) [BR:
gei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gei03016
]
GEI7407_0988
Enzymes [BR:
gei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GEI7407_0988
Transfer RNA biogenesis [BR:
gei03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GEI7407_0988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AFY65486
UniProt:
K9S698
LinkDB
All DBs
Position
complement(1184391..1185020)
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AA seq
209 aa
AA seq
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MALQDFQICDRDLSEDQLEEYLDAEAIALDTETMGLNPHRDRLCLVQLCNPEGQVTVIRI
AQGQTEAPNLRQLLEQEHSLKVMHFARFDVAVLRRQLGIFVKPLYCTKIASKLARTYTPR
HGLKDLIQELEQVELDKSSQSSDWGNAAHLSTDQLRYAANDVRYLISACRKLTVMLQREG
RWELAEQCFGCLPTIVELDLLQYNNIFEH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcactacaggattttcaaatttgcgatcgcgatctgtccgaggaccagctagaggag
tatctcgacgccgaggcgatcgccctcgacaccgaaaccatgggcctcaacccccaccgc
gatcgcctgtgcctggtccagctgtgcaatccggagggacaggtcaccgtgattcgtatc
gcccagggccaaaccgaagcgcccaacctgcggcagctcctcgagcaagagcatagcctc
aaggtgatgcactttgcccgctttgacgtcgcggtgctgcgccgccagctgggtatcttc
gtgaagccgctgtactgcacgaaaatcgccagtaagcttgcgcgcacctacaccccgcgc
cacggcctcaaggacctcatccaggagttggagcaggtggagctcgataaatcgtcccaa
agttcggactggggcaacgcggcccatctgtcgacggatcagctgcgctacgcagccaac
gatgtgcgctacctgatcagcgcctgccggaagctcaccgtcatgctgcagcgcgaaggc
cgctgggagctcgccgagcagtgctttggctgcttgcccacgatcgtcgagctcgacctg
ttgcagtacaacaatatctttgaacactag
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