Geitlerinema sp. PCC 7407: GEI7407_1197
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Entry
GEI7407_1197 CDS
T02366
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gei
Geitlerinema sp. PCC 7407
Brite
KEGG Orthology (KO) [BR:
gei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gei03032
]
GEI7407_1197
03400 DNA repair and recombination proteins [BR:
gei03400
]
GEI7407_1197
Enzymes [BR:
gei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GEI7407_1197
DNA replication proteins [BR:
gei03032
]
Prokaryotic type
DNA Topoisomerases
GEI7407_1197
DNA repair and recombination proteins [BR:
gei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GEI7407_1197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AFY65694
UniProt:
K9S7F9
LinkDB
All DBs
Position
complement(1428476..1431184)
Genome browser
AA seq
902 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPQGYRVEASMGHVRDLPQSASEIPGEIKGERWAQLGVNVD
GDFEPIYVVPKDKKKVVKELKDALKGVDELILATDEDREGESISWHLLQILNPKVPIKRM
VFHEITEDAIRAALKNCRTVNDQLVRAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVRRERQRRAFRKGAYWDLKATLAKAKNAFEAKLVSLGGTRLATGSDFDPDTGQ
ILAGREVVLLNETEAIALRERLQDKPWTVASIDERPSTRKPSPPFTTSTLQQEANRKLRL
SAQETMRTAQSLYEQGYITYMRTDSVHLSQQAIAAARDCVEHKYGPEYLSPEPRQYATKS
KGAQEAHEAIRPAGSRFRTPQETGLSGRELSLYDLIWKRTVATQMAEARQTHITVNIEVE
DAVFRASGKRIDFPGFFRAYVEGSDDPDAAIEDQEVILPNLKKGDQPTCKALEAIAHETQ
PPARYTEASLVKTLESEGIGRPSTYASIISTIIDRGYAQLVSNALVPTFTAFAVTSLLEK
SFPDLVDTSFTARMERTLDEISMGDVEWLPYLRQFYCGDSGLENQVKTREDQIDPNEART
VELDNITDAKIRIGRFGPYIEAENGDGMVKASIPKDLTPADLDREQIEVLLRQKTEGPDK
VGLHPETGEPIYLLIGSYGPYVQLGDATEEQPKPKRASLPKGVSPEQVTLEMAVGLLSLP
RTLGTHPETGARIQAGLGRFGPYVVHDQGKEGKDYRSLKAGDDVLSVTLERAIELLAEPK
RGRGSRSSRSKAPLRELGAHPEDGEAINVYEGPYGHYIKHGKTNAGIPEGETVESITLEK
ALELLAAKEGTKKKGTRKSSSTKTAGQKTTKTAAKKESSKTGTKTSTRSSTKSTRKKSSS
TS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctggtcattgtcgaatctcccaccaaggcgcgtaccattcggaactactta
ccccagggctaccgggttgaggcatccatggggcacgtacgcgacctgccacagtccgca
agcgaaattccaggcgagatcaagggagagcgatgggcccagctgggggtcaatgtagac
ggcgactttgagccgatctatgtggtgcccaaggacaaaaagaaagtcgttaaagagctc
aaagatgctctaaaaggcgttgatgaactgatcctggcaacggacgaagaccgcgaagga
gagagcattagttggcacttgctccagattctcaaccccaaggtgccgatcaagcggatg
gtcttccacgaaatcaccgaagacgccatccgggccgccctcaagaactgccggacggtg
aacgatcagctagtgagagcccaagagacccggcgcatcctcgatcgcctggtaggctac
accctgtcgcctttgctgtggaaaaagatcgcctgggggctttcagcggggcgcgttcag
tcggtggccgtgcgcctgctggtccgccgggagcggcagcgacgcgccttccgcaagggg
gcttactgggatctcaaggccacgctggccaaggccaaaaatgcttttgaagccaagctt
gtgagcctgggcggaacgcgactggcgacgggcagcgattttgatccggatacgggccag
attttggcaggtcgcgaggtcgtcttgctcaatgaaaccgaggcgatcgccctgcgggag
cggctccaggacaagccctggaccgtagccagcattgacgagcggccctccactcgcaag
ccttctccgccgtttacgacctccacgctgcagcaggaggcaaaccgcaagctgcgcttg
tccgcccaggaaaccatgcggacggcccaaagcctctacgagcagggctatatcacctac
atgcggacagactcggtgcacctgtcgcagcaggcgatcgccgcggctcgcgactgcgtt
gagcacaagtacggccccgagtacctcagccccgagccccggcagtacgccaccaagagc
aagggcgcccaagaagcccacgaagccattcgcccagcgggcagtcgcttccgcacgccc
caggaaaccggtctcagcggccgcgagctctctctctacgacctgatctggaagcggacc
gtcgccacccagatggccgaggctcgccaaacgcacatcaccgtcaacatcgaagtcgaa
gacgccgtgtttcgcgcgtcaggcaagcgaattgactttcccggctttttccgggcctac
gtggaaggctccgacgatccagatgcggcgatcgaagatcaagaagtgattttgcccaac
ctcaaaaagggcgaccagccaacctgcaaggccctagaggcgatcgcccacgaaacccag
ccgcccgcacgctacaccgaagcctccctcgtcaaaaccctcgaaagcgaaggcatcggc
cgccccagcacctacgccagcatcatcagcaccatcatcgatcgcggctatgcgcagctc
gtgagcaacgccctcgtgcccaccttcacggcctttgccgtcacctcgctcctcgaaaaa
agcttccccgatctcgtggacaccagcttcacagcccggatggagcggaccctcgacgaa
atctccatgggggacgtagaatggctgccttacctgcgccagttctactgcggcgattcg
ggcctcgaaaaccaggtcaagacccgcgaagaccagatcgaccccaacgaagcgcgcacc
gtcgagctcgacaacattaccgacgccaaaatccgcatcgggcgcttcgggccctacatc
gaggccgagaacggcgatggcatggtcaaagcctccattcccaaggatttgaccccggct
gacctagaccgggagcaaatcgaagtcttgctgcgccagaaaaccgaaggccctgacaaa
gtcgggctccatccagaaaccggcgagccgatctatctattaattggctcttatggaccc
tacgtccagcttggagacgccaccgaagagcagcccaagcccaagcgagcctctttgccc
aagggggtcagtcccgagcaggtcactctggagatggccgtgggcctgctgtccttgccg
cgcaccttggggactcaccctgagaccggcgctcgaatccaggccggcctgggccgcttt
ggtccctacgtggtgcacgatcagggcaaagagggcaaggactatcgctccctcaaagcc
ggtgatgatgtcttgagcgtgaccctagagcgcgccattgagctgctggcagagcccaag
cgaggacgcggcagccgcagcagccggtccaaagcaccgcttcgagaactcggcgctcat
cccgaggacggggaagccatcaatgtttatgagggtccctacggccactacatcaagcac
ggcaaaactaacgcgggaattcccgaaggcgaaaccgtcgagtcgatcaccctagagaaa
gccctcgagctcctagcggccaaggaaggcacgaagaaaaagggtactcgcaagagcagc
agcaccaagactgctgggcagaagaccaccaaaactgccgccaaaaaagagtcgtcgaag
accgggactaagaccagcacccggtcttcgaccaaatccacccgcaagaagtcctcgtcc
actagctag
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