Geitlerinema sp. PCC 7407: GEI7407_1298
Help
Entry
GEI7407_1298 CDS
T02366
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gei
Geitlerinema sp. PCC 7407
Pathway
gei03420
Nucleotide excision repair
gei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GEI7407_1298
03430 Mismatch repair
GEI7407_1298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gei03400
]
GEI7407_1298
Enzymes [BR:
gei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GEI7407_1298
DNA repair and recombination proteins [BR:
gei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GEI7407_1298
MMR (mismatch excision repair)
Other MMR factors
GEI7407_1298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DEAD
AAA_12
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AFY65792
UniProt:
K9S5B4
LinkDB
All DBs
Position
1554480..1556861
Genome browser
AA seq
793 aa
AA seq
DB search
MTQFTDFLSHLNPSQRQAVEHFCGPLLVVAGAGSGKTRALTYRIANLVLTHRVDPESILA
VTFTNKAAREMKERIEKLFAERKAQADHGKPLNLLTPYEQTKLRSQVYKEITKPLWIGTF
HALCARILRFDIDKYQSREGHTWTKTFSIFDDSDSQDLVKDIVVNELNLDDKKFNPRNVR
YDISNAKNQGWSPQDVEREISSYKGRVIADVYSRYQARLAANNALDFDDLILIPVQLFRQ
NEQVLAYWHQRFRHILVDEYQDTNRTQYDLIRLLVTNGEDTRTFEQWQHRSVFVVGDADQ
SIYSFRAADFKILMGFQADFGDGLPDDDTRTMVKLEENYRSTQNILQVANHLIENNTERI
DKVLKPTRGAGEPIGCFCFDDEREEAEAVVSQIRTLNQIHPDLNWGDFAILYRTNAQSRS
FEEVLVRTNVPYTVVGGLRFYDRKEVKDIVGYLRAIANPSDSVSLLRVINTPRRGIGKTT
IDRLQTAAQELGVPLWEILSDETSVATLAGRSAKSVTRFAEILETWRSRLDEVSASQIVQ
GIIEDTGYISDLKAQGTDEALDRIQNVEELYNAVLQYEEENEDTTLTGFLSNASLASDRD
SNNEEEERVSLMTLHSSKGLEFPVVFLVGLEQGLFPNFRSMQDPASLEEERRLCYVGITR
AQERLFISHARSRRLWGSRESATPSLFLAELPREFLIANTATAVPNYRIQSTIPERQQQR
RAATQKSSKEETPAKPAEKWSVGDRLIHKSFGVGQVTHVFDNGSNKVHIAVKFPGIGQKI
LDPRLAPLERVMQ
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcaccgactttctgagccacctcaacccctcccagcgtcaggccgtcgaa
cacttttgcggccccctcttggtggtagcaggagccggttccggcaagacgcgggcgctg
acctaccggatcgccaacttggtcctgacccatcgcgtcgaccccgagagcattttggcg
gtgaccttcaccaacaaggccgcccgcgaaatgaaggagcggatcgaaaagctgtttgcc
gagcgcaaggcccaggccgatcacggcaaacccctcaacctgctgacgccctacgagcag
accaagctgcgatcgcaggtgtacaaagaaatcaccaaacccctgtggatcggcaccttt
cacgctctgtgcgcccggattttgcgctttgacatcgacaagtaccagagccgcgaaggc
cacacgtggaccaaaaccttctcgatctttgatgactccgactcccaggacctggtcaag
gacatcgtcgtcaatgagctgaacctcgacgacaagaagttcaatccgcgcaacgttcgc
tacgacatcagcaacgccaaaaaccagggctggtcgccccaggacgtggagcgagaaatc
tccagctacaaggggcgcgtgattgccgatgtctactcgcgctatcaggctcgcctcgcc
gccaacaacgccctcgacttcgacgacctgatcttgattccggtgcagctctttcgccaa
aacgagcaggtcctggcctactggcaccagcggtttcgccacattttggtggacgagtat
caggacaccaaccgcacccagtacgacctgatccggctgctggtcaccaacggcgaagac
actcgcacctttgagcagtggcagcaccgctcggtgtttgtggtgggggacgcggaccag
tcgatctattcgttccgggcggcggatttcaagattttgatggggttccaggcggacttt
ggggacggactgccggacgacgacacccgcaccatggtcaagctggaggaaaactaccgc
tcgacccaaaatatcttgcaggtggccaaccacctgatcgaaaacaacaccgagcgcatc
gacaaagtcctcaagccgacgcggggcgcgggggagcccattgggtgcttctgctttgat
gacgagcgggaagaagcggaggcagtggtcagccagatccgcaccctgaaccagattcac
cccgatctcaactggggcgattttgcgatcctctaccgcaccaatgctcagtcgcgctcc
tttgaggaggtgctggtgcggaccaatgtgccctacacggtggtgggggggctgcgcttc
tatgaccggaaagaagtaaaggatattgtgggctatctgcgggcgatcgccaacccatca
gacagcgtgagcctgctgcgggtgatcaacacgccccgccgaggcatcggcaaaaccacg
atcgatcgtctccagacagcggctcaggagctaggggtgccgctgtgggaaatcctctct
gatgaaacctcggtcgcgacgctggcggggcgatcggccaagtcagtgacgcgctttgct
gagatcctggaaacctggcgatcgcgcctcgacgaagtctctgcctctcagatcgtccag
ggcatcatcgaggacacgggctacatcagcgacctcaaggcccagggcaccgacgaagcc
cttgaccggatccagaacgtggaggagctatacaacgcggtgctccagtacgaggaggaa
aacgaggacacgacgctgacgggctttttgtccaatgcttctctggcctcggaccgcgac
agcaacaatgaagaggaggagcgcgtttctctgatgacgctgcactcctcgaaggggctg
gagttcccggtggtgtttttggtggggctggagcagggcctgttccccaatttccgctcg
atgcaggacccggcgtccctagaagaggagcggcggctgtgctatgtgggcatcacgcgc
gcccaggagcgcctgttcatcagccacgcgcgatcgcgccgtctgtgggggtctcgcgag
tcggcgacgccgtcgcttttcttggcagagctgccacgggagttcttgatcgccaatacg
gcaacggcggtgcccaactaccgcatccagtcgaccatcccggagcgccagcagcagcgc
cgcgccgccacccagaaatcatcgaaggaagagacccccgccaagcccgccgaaaaatgg
tccgtgggcgatcgcctcatccataagagctttggggtgggtcaggtgacgcacgtcttc
gacaacggcagcaacaaggtccacatcgcggtcaagtttcccggcatcggccaaaaaatc
ctggatccccgcctcgcgcccctagaacgcgtgatgcagtaa
DBGET
integrated database retrieval system
