Geitlerinema sp. PCC 7407: GEI7407_3773
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Entry
GEI7407_3773 CDS
T02366
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
gei
Geitlerinema sp. PCC 7407
Brite
KEGG Orthology (KO) [BR:
gei00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GEI7407_3773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gei03021
]
GEI7407_3773
Transcription machinery [BR:
gei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GEI7407_3773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
PgaD
CCP_MauG
DUF2316
PhetRS_B1
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AFY68240
LinkDB
All DBs
Position
4596227..4597324
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AA seq
365 aa
AA seq
DB search
MDTDTTLRHPPTEDAPSTFEDRLTEDHLTEESAMTSLAPSTRTSSYRKDASDDAVGAFFK
EMARYPLLKPDEEVELARHIQQLNEIEELRAQFEEEHGRRPNKAELADALGLTERQLEQR
LHRSQVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAMGLNRATEKFDPDKGYKFS
TYAYWWIRQGITRTIANDARTIRLPIHIVEKLNKLKKAQRELRRDLKRPPTEAELATVLE
ITEEQLQQLLQVRRQSLSLNVRVGREEDTELVDLLEDNNSRSPEAQMSERMMRQEIAEVL
SEVLTEREKEIVCLRYGIETGETHTLEEVGNIFNLSRERVRQIQTRAMRKLRRPQVARRL
QGWLK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggacactgacacaacgcttcgccatcccccaaccgaagacgctcctagcacttttgaa
gaccgtttaaccgaagaccatttgaccgaggagtcagccatgacctcccttgcccccagc
acccgcaccagcagctatcgcaaagatgcctccgacgacgccgtcggcgccttcttcaag
gagatggctcgctaccccctcttgaagccagacgaagaagtcgagctggcgcgccacatt
cagcagctcaacgagatcgaggagctgcgagctcaatttgaagaagagcacggccgccgc
cccaacaaggcagaactcgccgacgcgctgggcctgaccgagcgccagctagagcagcgg
ctgcaccgcagccaggtcgccaagcgcaaaatgatccgctcgaacctgcggctggtggtc
tccatcgccaagcgctacctcaatcggggggtgccgtttctagatctgattcaagaagga
gccatgggcctcaaccgggccacggagaagtttgaccccgacaagggctacaaattttcg
acctacgcctactggtggattcgtcagggcattacccgcaccatcgccaacgatgcccgc
acgatccggctaccgatccacatcgtcgagaagctcaacaagctcaagaaggcccagcga
gagctgcgccgcgacctcaagcgcccgccgacggaggcggagctggcaacggtcctagaa
atcacggaagagcagctccagcagctgttgcaggtgcgccgccagtccctgtcgctgaac
gtgcgggtgggccgcgaagaggatacggagctcgtagatctactggaggacaacaattcg
cgatcgcccgaagcccagatgagcgagcgcatgatgcgccaggaaatcgctgaggtgctc
agcgaggtcctcacggagcgcgaaaaagagattgtgtgcctgcgctacggcattgagacc
ggcgaaacccatacgctggaggaggtcggcaacattttcaatttgtcccgagagcgggtc
cgccagatccagactcgagcgatgcgcaaactgcggcggcctcaggtcgcccgacgcttg
cagggctggctgaaatag
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