Geobacillus sp. JS12: A0V43_00780
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Entry
A0V43_00780 CDS
T04412
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gej
Geobacillus sp. JS12
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gej03400
]
A0V43_00780
DNA repair and recombination proteins [BR:
gej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A0V43_00780
Archaeal homologous recombinant proteins
A0V43_00780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
CobU
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AMQ19752
UniProt:
A0A142CYA0
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Position
137622..138800
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AA seq
392 aa
AA seq
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MRILHTADWHLGRTLEGRSRMAEQEAFVDELVEIVKKEQIDIILVAGDVFDSVNPPAAAE
QLFYESLARLSDKGRRPVAVISGNHDHPDRISAARTLMCAHNIFLFGRPQAAVCRIDVPS
CGETMMLAPLAYPSESRLAELLSSDCKETTMRDRYDDRIRALLAAMAASFTAETVNIAMS
HLYVAGGRTSDSERPIEVGGAYTVAAESLPKAAQYVALGHLHRPQDVKQAKTAARYSGSP
LAYSFSEAGQAKSVTVVDVHPGRKAKVAEIPLAAGKPLIRWKATEGLAQVYRWCEEGRDR
SSWIDLEIHVTESLTMEEIDRLRKLHPGFVHIRPVLPNRAEEMMEMSREPLSLEEMFHRF
YERQTGGQTPDEELVRLFLELAAEEEKEGEGE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttgcataccgcggactggcatttggggcgaacgcttgagggacggagtcgg
atggccgagcaagaggcatttgttgatgagcttgtggagattgtcaagaaagaacaaatt
gacatcatccttgtggccggcgacgtattcgactccgtcaatccgccggcggctgcggaa
caactgttttatgaaagcctcgcccgcctgtccgacaaaggacgccgcccggtggcagtc
atcagcggcaaccacgaccaccccgaccggatcagcgctgcccggacgttgatgtgtgcg
cacaacatttttcttttcggccgcccgcaagcggctgtttgccggattgacgttccatcg
tgcggcgaaacgatgatgcttgctccgttggcctatccgtccgaatcgcgcctcgccgag
ctgttgtcatccgactgtaaggagacgacgatgcgcgatcggtacgatgaccgcatccgc
gccctattagcggcgatggccgcctcgttcacggcggagaccgtcaatatcgcgatgagc
catctttacgttgccggcggacgtacgtccgattccgagcggccgattgaagtcggcggc
gcttatacggtggcggctgagagcttgccgaaagccgcgcaatatgtggcgcttggccat
ctgcaccggccgcaggatgtcaagcaggcaaagacggcggcgcgctattccggctcgccg
ttggcgtacagcttttccgaagccggtcaagccaaatcggtcacggtcgttgacgtgcat
ccaggcaggaaggccaaggtggcggagataccgctcgctgccggcaaaccgctcatccgt
tggaaggcgacagaggggctcgctcaagtataccgctggtgtgaggaaggaagagaccga
tcaagctggatcgatttggagatccatgtgaccgagtcgttgacaatggaagaaattgat
cggctgcgtaagcttcatcccggatttgtccacattcgcccggtgcttcccaatcgggcg
gaagagatgatggaaatgagccgcgagccgctttcacttgaagaaatgtttcaccgcttt
tacgaacggcagactgggggacaaacgccggatgaagagctcgtccgcctctttttggag
ctggcggcggaagaagagaaggaaggggagggagaatga
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