Geobacillus sp. JS12: A0V43_03370
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Entry
A0V43_03370 CDS
T04412
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
gej
Geobacillus sp. JS12
Pathway
gej02020
Two-component system
gej02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A0V43_03370
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A0V43_03370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gej03021
]
A0V43_03370
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gej02035
]
A0V43_03370
Transcription machinery [BR:
gej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A0V43_03370
Bacterial motility proteins [BR:
gej02035
]
Flagellar system
Flagellar assembly proteins
Stator
A0V43_03370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
TetR_N
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AMQ20167
LinkDB
All DBs
Position
657674..658429
Genome browser
AA seq
251 aa
AA seq
DB search
MGSALKGEERKYWDEWIHGRDRRAAEELVQRYMPLVFYHVQRLSATLPSSVPKDELVSLG
LVGLYDALEKFDPSRDLKFDTYASFRIRGAILDGLRKEDWLPRSMRDKAKKIEEAIERLE
QRHMRSVTAKEIAAELGMTEEEVQAAASETFFSHWLPLGQTTVDEDEGLLSVRDDRAPLP
EEQIVKQEMIEKLAEAIGQLNEKEQLVISLFYKEELTFTEIGSLLHLSTSRISQIHAKAL
WKLRRFFEKEP
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcgctaaaaggagaagaacggaaatattgggatgaatggatccatggccgc
gaccgtcgcgcggccgaggagctggtgcagcgctatatgccgcttgttttctaccacgtg
cagcggctttcggcgacgctgccgagctccgtgccgaaggatgagctcgtcagccttgga
ctcgtcggcttatacgatgcgttggagaaatttgatccatcgcgtgatttgaagttcgac
acgtacgcctcgttccgcatccgcggcgccatcttagacggtttgcgcaaagaagactgg
ctgccgcgcagcatgcgcgataaggccaaaaaaattgaggaagcgatcgagcggcttgaa
cagcggcacatgcgatcggtgacggcgaaagagatcgccgctgagctcgggatgacggaa
gaggaagtgcaggcggcggcgagtgaaacgtttttttcccattggctgccgctcgggcag
acgaccgtcgacgaagatgaaggactgctttcggttcgcgacgaccgcgctccgcttccc
gaggagcaaatcgttaagcaggaaatgatcgaaaagctggctgaagccatcggacagctg
aatgaaaaagagcagctcgtcatcagtttgttttacaaagaggagctgacgtttacagaa
atcgggagccttttgcatttgtcgacatcaagaatttcgcaaattcatgcgaaagcgctt
tggaaactgcgccgcttctttgaaaaagagccatga
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