Geobacillus sp. JS12: A0V43_03470
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Entry
A0V43_03470 CDS
T04412
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gej
Geobacillus sp. JS12
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gej03016
]
A0V43_03470 (truB)
Enzymes [BR:
gej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A0V43_03470 (truB)
Transfer RNA biogenesis [BR:
gej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A0V43_03470 (truB)
Prokaryotic type
A0V43_03470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMQ20185
UniProt:
A0A142CZI3
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All DBs
Position
678657..679565
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AA seq
302 aa
AA seq
DB search
MDGVLLLNKPKGMTSHDCVAKVRRLLGVKKAGHTGTLDPNVSGVLPICLGKATRIAEFLT
GTTKTYEGKVTLGAATTTEDADGDIIAARPVDRPIARAEIEAVFDSLTGEIEQTPPMYSA
VKVGGKKLYEYARAGIEVERPTRRVTIYELELLDEREQFFGETVSFRFRVTCSKGTYVRT
LAVMIGERLGYPAHMSDLIRTASGPFRLEDCVTFEDVERRAADGTADALLIPIERALFHL
PKYEINDKVAEKVKNGVLLRLPAFLEKLDGPVVLVSPEREALALYVKHPARPGLMKPLKV
FH
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtattgctgctgaataaaccgaaagggatgacgtctcacgactgcgtagcc
aaagtgcgccgtctgcttggcgtaaaaaaagcgggacacaccggcacgcttgacccaaac
gtgtccggtgtgctgcccatttgccttggcaaggcgacgcgcatcgccgagtttttgacc
gggacgacgaaaacgtatgaaggaaaagtgacgcttggcgccgcgacgacaaccgaagat
gcggacggcgacatcatcgccgcccgtccggttgaccggccgattgcgcgcgcggaaatc
gaagcggtgtttgacagcttgaccggagaaattgagcaaacgccgccgatgtactccgcg
gtgaaagtgggcggcaaaaaactgtatgaatacgcgcgcgccggcatcgaagtcgaacgt
ccgacgcgacgcgtgaccatttatgagctcgaactgcttgatgaacgtgaacaattcttt
ggggaaacggtgtcatttcgctttcgcgtcacgtgcagcaaaggcacgtacgtgcgtacg
ctggcggtgatgatcggcgagcggctcggctatccggcgcatatgtccgacctcatccgt
acggcgtccgggccgtttcggcttgaagattgcgtaacgtttgaagacgttgagcgccgg
gcggccgacgggacggctgatgccttgctcatcccgatcgagcgggcgctttttcatttg
ccgaaatatgaaatcaatgataaagtagcagagaaggtaaaaaacggggtgctgctccgg
cttcccgcttttttagagaagcttgacgggccggtcgtgcttgtttcgcccgagcgggaa
gcgctggccctgtacgtgaagcatccggcgcgccccggcttgatgaaaccgctcaaagtg
tttcattaa
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