Geobacillus sp. JS12: A0V43_10765
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Entry
A0V43_10765 CDS
T04412
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gej
Geobacillus sp. JS12
Pathway
gej03410
Base excision repair
gej03430
Mismatch repair
gej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0V43_10765
03430 Mismatch repair
A0V43_10765
03440 Homologous recombination
A0V43_10765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gej03400
]
A0V43_10765
DNA repair and recombination proteins [BR:
gej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A0V43_10765
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A0V43_10765
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A0V43_10765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
YjeF_N
DUF913
Motif
Other DBs
NCBI-ProteinID:
AMQ22599
LinkDB
All DBs
Position
complement(2196326..2198692)
Genome browser
AA seq
788 aa
AA seq
DB search
MLKAKTRWEVERLDEQTVRRLAEEAGVTPLLARLLVRRGVRTASEAAAFLNPLRQPFHDP
FLLDGMERAIQRLKRAIDAGERVLVYGDYDADGVCSTSVMVSALKEAGASVEFYIPNRFT
EGYGPNMAAFRSAKERGVSVIVTVDNGIAAVKEIAAANEWGMDVIVTDHHEPGPVLPEAH
AIIHPKQPGSTYPFRDLAGVGVAFKVAHALLGRVPRHLLDLVAIGTIADLVPLVGENRLF
VAHGLEALRATERIGLRALFRQCRINAAAINEQTVGFVIAPRLNAAGRLGGADPAVALLM
TDDENEAVQLAAEMDELNRERQQLVAQIAEEAADMVRRQFPPEEHRVLVVAGEGWNAGVV
GIVASKLVEQFYRPAVVLSIDQEKGIAKGSARSIHGFDLFASLSQCRDLLPHFGGHPMAA
GMTLALDDVEELRQRLNAIAAETLSEDDFTPPTFIDASCSIAELTLDAARGLERFAPFGV
GNPRPLVLIEGASVETMRRVGANGAHMKAVFSQDGAAIDAIGFGLGPLCEEIAPDARISA
VGELSVNEWNGFAKPQLSLCDLAVSDCQLFDVRGCRDVRPLLERLPKEKRLVVSFRCKTG
QRPDVAPFRGELHCVPTEEEAGALSIDDRYVVLLDVPPRLALLSALLGSGRPARIYAVFA
QPEAQFFRTFPTREHFKWFYAFLHQHRSFPLAKRGGELARARGWTEETVHFMAKVFLELD
FISEQNGVISLVHQPAKRDLHESPTYRRRRDELEAEHQLVYSTYEQLKRCLAEMTRSQTH
EEANVSWT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagcgaaaacgcgttgggaggtggagcgcctcgatgagcagacggtgaggcgg
ctggctgaggaagccggcgtcacgcccttattggcgaggcttctcgtccgccgcggggtg
cggacggcctcggaggcggcggcgtttctcaatccgcttcgccaaccgtttcatgatccg
tttttgcttgacgggatggagcgagcgattcagcgtctaaagcgggcgatcgacgcgggt
gaacgcgtgttggtatacggcgattacgatgccgatggcgtttgcagcacgtcggtgatg
gtgagtgctctcaaggaggcgggggcgtcggtcgagttctacattccgaaccgatttacg
gaaggatacgggccgaacatggcggcgtttcgctccgcaaaagagcgcggcgtttccgtc
attgtgaccgtcgacaatgggattgcggcggtcaaggaaattgcggccgccaacgagtgg
gggatggatgtcatcgtaacggatcaccacgagccaggtccggtgttgccggaggcgcat
gcgatcattcatccgaagcagccgggaagtacatatccgtttcgcgatttagccggcgtc
ggcgttgcgtttaaggtagcccatgccttgcttgggcgggtgccgcgccatttgcttgat
ttggtcgcgatcggcacgatcgctgatttggttccgcttgttggggaaaaccgcctcttt
gttgcacacgggcttgaagcgttgcgagcgacggagcgcatcgggctgcgcgctcttttt
cggcaatgccgcattaatgcggcggccatcaacgaacagacggtcggatttgtcatcgct
ccgcgcttgaacgcggcggggcgcctcggcggcgccgatccggcagtggcgctcttaatg
acggacgatgagaacgaagcggtgcagctggcggcggagatggatgagttaaaccgcgaa
cgtcagcagcttgtggcacaaatcgctgaagaagcggcggacatggtgcgccgccaattt
cctcctgaggaacatcgcgtcttggttgtggcaggcgaaggatggaatgccggagtggtg
ggcattgtcgcttctaagcttgtcgagcagttttaccgcccggcggtcgtgctttccatc
gaccaggaaaaagggatcgccaaagggtcagcccgcagcattcatgggtttgacttattc
gccagcctgtcgcaatgccgcgacctgttgccgcactttggcggccacccgatggcggcg
gggatgacattggcgcttgatgatgtcgaagaattgcggcaacggctgaacgccatcgcc
gccgaaacgttgtctgaggacgattttacgccgccgacgttcatcgatgcttcctgttcg
attgctgagttgacgctcgacgccgcccgcggtcttgagcggttcgctccgtttggcgtc
ggcaatccgcggccgcttgttctcattgaaggggcgtccgttgaaacgatgcggcgcgtc
ggggcgaacggagcccatatgaaagccgtcttttcccaagacggggccgcgatcgatgcc
atcggcttcggcctcgggccgttatgcgaagaaatcgctccggatgcgcgcatttcggcg
gtcggggagctgtcggtgaacgaatggaacgggttcgccaagccgcagctgtcgttgtgt
gatctggcggtcagcgactgccagctgtttgacgtccgcggctgccgcgacgtccgtcca
cttcttgagcggctgccaaaagagaagcggctagtcgtctcctttcgctgcaaaactgga
cagcgcccggacgtggctccatttcgcggggagcttcattgcgtgccgaccgaagaagag
gcgggcgccttatcgattgacgaccgctatgtcgtgctgcttgacgtgccgccgcggctg
gccttgctgtcggcgcttcttggcagcgggcggccggcgcgcatttacgcggtgttcgcc
cagcccgaggcgcaatttttccgcacgtttccgacgcgcgaacattttaaatggttttac
gcctttttgcatcaacaccgttcgtttccgctcgccaagcgcggcggtgagctggcccgc
gcccgcggttggacggaagagacggttcattttatggcgaaggtgtttttagagcttgac
tttatcagcgaacaaaacggcgtcatttcgctcgttcatcagccggcgaagcgcgatttg
cacgaatcgccgacgtaccgccggcggcgggacgagctcgaggcggagcatcagttagtc
tattccacttacgagcaattgaaacgctgtttggcggaaatgacacgttcgcaaacgcac
gaggaggcaaacgtatcatggacttaa
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