Geobacillus sp. JS12: A0V43_11580
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Entry
A0V43_11580 CDS
T04412
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gej
Geobacillus sp. JS12
Pathway
gej03030
DNA replication
gej03410
Base excision repair
gej03420
Nucleotide excision repair
gej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A0V43_11580
03410 Base excision repair
A0V43_11580
03420 Nucleotide excision repair
A0V43_11580
03440 Homologous recombination
A0V43_11580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gej03032
]
A0V43_11580
03400 DNA repair and recombination proteins [BR:
gej03400
]
A0V43_11580
Enzymes [BR:
gej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A0V43_11580
DNA replication proteins [BR:
gej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A0V43_11580
DNA repair and recombination proteins [BR:
gej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A0V43_11580
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0V43_11580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Enkurin
Motif
Other DBs
NCBI-ProteinID:
AMQ21427
UniProt:
A0A142D325
LinkDB
All DBs
Position
complement(2364048..2366684)
Genome browser
AA seq
878 aa
AA seq
DB search
MRLKKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAF
DAGKTTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLA
ARAEQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPETVHEKYGLTPEQIVD
LKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASIDEIKGEKLKETLRQHREMAL
LSKKLAAIRRDAPVELSLDDIVYQGEDREKVVALFKELGFQSFLEKMESPSSEEEKPLAK
MAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFV
AWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQ
YEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWALERPFLDELRRNEQDRLLVELE
QPLSSILAEMEFAGVKVDTKRLEQMGEELAEQLGTVEQRIYELAGQEFNINSPKQLGVIL
FEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPD
TKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIE
LRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISD
YGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITS
RNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPK
EEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaaaaaaaagcttgttttaatcgacggcagcagcgtggcgtaccgcgccttt
tttgccttgccgcttttgcataacgacaaaggcatccatacgaacgccgtctacgggttt
acgatgatgttgaataaaattttggcggaagaagagccaactcatatgcttgtcgcgttt
gacgccgggaaaacgacgttccggcatgaagcgtttcaagagtataaaggtgggcgccag
cagacgccaccggagctgtcggagcagtttccgctgttgcgcgagctgctgagggcatat
cgcatccccgcctatgaactcgagaactacgaagcggacgatattatcggaacgcttgcc
gcccgcgctgagcaggaagggtttgaggtgaaagtcatttccggcgaccgcgatctgacc
cagctcgcctccccccatgtgacggtggacattacgaaaaaagggattaccgatatcgaa
ccatacacgccggagacggtccacgaaaaatacggcttaactccggaacaaatcgttgat
ttgaaaggattgatgggcgacaaatcggacaacatccccggagtgccgggcatcggggaa
aagacggcggtcaagctgctcaggcaattcggcacggtcgaaaatgtgcttgcctccatt
gacgagatcaaaggcgaaaagttgaaagaaacgctgcgccaacaccgggagatggcgctg
ttaagcaaaaagctcgccgccattcgccgcgacgccccggtcgagctctcgcttgatgac
attgtctatcaaggggaagaccgggagaaagtggtcgctttatttaaagagcttgggttt
caatcgtttttagagaaaatggaatcgccgtcatcagaagaggaaaaaccgcttgccaag
atggcatttacgcttgctgaccgcgtgacggaggagatgcttgccgacaaggcggcgctt
gtcgttgaagtggtcgaggaaaattatcatgatgcgccgatcgtcggcatcgctgtggtc
aacgaacatggacggtttttcctgcgcccggagacggcgcttgccgatccgcagtttgtc
gcctggcttggtgatgaaacgaagaaaaaaagcatgtttgactcaaagcgcgcggcagtc
gccttgaaatggaaaggaattgagctatgcggcgtttcctttgatttattgctggccgcc
tatttgcttgacccggcgcaaggtgttgatgatgtagctgccgcagcaaaaatgaagcaa
tacgaagcggtgcgcccggatgaagcggtgtatggcaaaggggcgaagcgggccgtgccg
gatgagccagtgctcgccgagcatctcgtccgcaaggcggcggcgatttgggcgctcgaa
cggccgtttttggatgagctgcgccgcaacgaacaagatcggttgctcgtcgagctcgag
cagccgttgtcttcgattttggcggaaatggaatttgccggagtgaaagtggatacgaag
cgactcgaacagatgggcgaagagctcgccgagcagctcggcacggtcgagcagcgcatt
tatgagctcgccggccaagaattcaacatcaattcaccgaaacagctcggcgtcatttta
tttgaaaaactgcagctgcccgtcttgaaaaaaacgaaaaccggctactccacttcggcg
gatgtgcttgaaaaacttgcgccttatcacgagatcgtggaaaacattttgcattaccgc
cagcttggcaagttgcagtcgacgtatattgaaggattgctgaaagtcgtgcgacccgat
acaaagaaggtgcatacgattttcaatcaggcgttgacgcaaaccggacggctcagctcg
acggagccgaacttgcaaaacattccgattcggcttgaggaaggacggaaaatccgccaa
gcgttcgtgccgtcggagtctgattggctcattttcgccgccgactactcacaaattgag
ttgcgcgtcctcgcccatattgcggaagatgacaatttaatggaagcgttccgccgcgat
ttggatatccatacgaaaacagcgatggacattttccaagtgagcgaggacgaagtgacg
cccaacatgcgccgtcaggcgaaggcggtcaactttgggatcgtttacgggatcagtgat
tacggcttggcgcaaaacttaaatatttcgcgcaaagaggcggctgaattcatcgagcgc
tacttcgaaagcttccctggcgtgaagcggtatatggaaaacattgtgcaagaagcaaaa
cagaaagggtatgtgacgacgctgctgcatcggcgccgctatttgccggatatcacgagc
cgcaacttcaacgtccgcagttttgctgaacggatggcgatgaacacgccgattcaaggg
agcgccgctgacattattaaaaaggcgatgatcgatctgaacgccagactgaaggaagag
cggctgcaagcgcgccttttgctgcaggtgcatgacgagctcattttggaggcgccgaaa
gaagagatggagcggctgtgccggctcgttccggaagtgatggagcaagcggtcacactt
cgcgtgccgctcaaagtcgattaccattatggctcgacgtggtatgacgcgaaataa
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