Geobacillus sp. JS12: A0V43_11655
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Entry
A0V43_11655 CDS
T04412
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gej
Geobacillus sp. JS12
Pathway
gej03030
DNA replication
gej03430
Mismatch repair
gej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A0V43_11655 (dnaE)
03430 Mismatch repair
A0V43_11655 (dnaE)
03440 Homologous recombination
A0V43_11655 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gej03032
]
A0V43_11655 (dnaE)
03400 DNA repair and recombination proteins [BR:
gej03400
]
A0V43_11655 (dnaE)
Enzymes [BR:
gej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A0V43_11655 (dnaE)
DNA replication proteins [BR:
gej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A0V43_11655 (dnaE)
DNA repair and recombination proteins [BR:
gej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A0V43_11655 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AMQ21441
UniProt:
A0A142D339
LinkDB
All DBs
Position
complement(2381272..2384553)
Genome browser
AA seq
1093 aa
AA seq
DB search
MMFVHLHVLSGYSLFQSAAAVEALAARAKQLGYQALALTDRNVLYGAIPFYRECKQNGIR
PIIGVTADVALSGEEAFPLVLLAANEEGYRHLLEISTMMQMGETKHMEEAALVRLSGGII
AITPGSEGRVESLVAAGEWERAKEALGRYHQLFPGRLYVAVQRGEQTRAPYEAGLLQLAE
ETGVPIVATNDVRYVERSDAVAWRCLQAIGRGALLADIEDDNGRYLAGPEEMARRFADLP
EALENSLAIADQCELQIEFGGWRLPAYPVPDGETADSYLRRLSEQGLARRVPSADERYWR
RLSHELDVIQSLHFSDYFLIVADVLAYARRRGILTGPGRGSAAGSLVAYALSITDVDPIK
YGLLFERFLNPERASVPDIDLDFPDDRREEVIRYVADKYGRDRVAQIITFGTFGAKAALR
ETAKALGVPGREAEQVAALLPSKQSVTLRQWHAESAAFRRAVAAVPQGREWLAVAQKLEG
LPRHTSIHAAGVIISPEPLVRFVPLQPSHGEWPLTQYAMGALEALGLLKIDFLGLRTLTL
IEQIVRLIERQTGKSFDIRTLPLDDEKTYALLGAGDTNGIFQLESSGMKRVLAELRPSEF
EDVVAVNALYRPGPMQMIPVYIRRKRGEEPIEYIHPDLAPILAPTYGVLIYQEQIMQIAA
RLAGFSLGQADVLRRAVAKKEKALLAKQRQAFVAGCVANGYPKAVAEELYRHIVRFADYG
FNRSHAVSYALLSYAMAYMKAHYPLCFYAVMLTNASGDREKAAVYYWEAARKGINVLLPS
VNKSVFRSFVEGSAIRLGLAMVKQVGSAAKLIVEERKANGPFADFFDFAARLLPKGLGRP
ALEALISVGAFDEFGADRASLLASIDIAIEHAQWVQALQAGGLSLKPKYAAAHSWPLSER
RRREAEFLGFAVTPHPAAVCRPLLQAAGAVCVADVQGPSTVVGGAVVRIRKTRTKQGEEM
AFFTVGDESGELEAVAFPNVYRRAADVLKEGQFVLLAGMIEVRGGRRQLIIRRAERLLVS
ALYINAGHALSDGPRLAALKQLLEQHHGSIPVYLYDEAKRKLLRLPERYAVDFTAPLVDE
LLSLFGAGRVAVK
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcgttcacttgcatgtgttgagcggatacagtttgtttcaaagtgcggcggcg
gtggaggcgcttgcagcgagggcgaaacagctcggctatcaagcgctcgcgctcacggac
cggaatgtgttgtatggcgctattccgttttaccgggaatgcaagcagaacggcattcgc
ccgattatcggcgtgacggctgatgtcgctctttctggggaggaagcgttcccgctcgtg
ctgttggccgccaatgaagaggggtatcgccatttgcttgaaatcagcaccatgatgcaa
atgggggaaacaaagcatatggaggaagccgctcttgtgcgcttaagcggcggcatcatc
gccatcactcccggaagcgagggacgcgtcgagtcgcttgtagccgccggcgaatgggag
cgggcgaaagaggcgcttggccgctatcatcagctgtttccaggacggctgtatgtcgcc
gttcagcgcggcgagcaaacgcgagccccatatgaagccgggttgttgcagctggcggag
gaaaccggcgtcccgatcgtggcgacgaacgacgtccgttacgtggagcgcagcgatgcc
gtggcgtggcgttgcttgcaggccatcggccgcggcgcgctgctcgctgacattgaggac
gataacggccgctatttggcggggccagaggagatggcgcgccggtttgcggacttgccg
gaggcgctcgagaacagcctggcgatcgccgatcaatgcgagttgcagatcgagtttggc
ggctggcggctgccggcgtatcccgttccggacggagagacggccgacagttatttgcgc
cgcttatcggaacaagggctcgcccgacgcgtgccgtcggccgatgagcgctactggcgt
cggctttcgcatgagctggatgtgattcagtcgcttcatttcagcgactattttttgatc
gtcgccgatgtgctcgcctacgcccgccgacgcggcatcttaaccggcccgggccgcggt
tcggcggccgggtcgcttgtcgcctacgcattgtcgatcaccgatgtcgatccgatcaag
tatgggcttttgtttgaacggtttttaaatccggagcgggcgtcggtgccggatattgac
ttggattttcctgatgaccggcgcgaagaagtgattcgctatgtggcggataaatacggg
cgcgaccgcgttgcgcaaatcattacgttcggcacgttcggcgccaaagcggcgctgcgc
gagacggccaaagcgcttggcgtccctgggcgggaggcggaacaggttgcggcgctcttg
ccgagcaaacaaagtgtgacgctccgccaatggcatgccgagtccgccgcttttcggcgc
gcggtggcagcggttccgcaagggagagagtggctggctgttgcgcaaaaactggaaggg
ctgccgcgccatacgtcgatccacgctgctggtgtcatcatcagcccggagccgctcgtt
cgcttcgtgccgctgcagccaagccatggcgaatggccgctgacgcaatacgcgatgggg
gcgcttgaagcgcttggattgctgaaaattgattttctcggtttgcgcacgctcacgttg
atcgagcagatcgtgcgtttgatcgagcggcagaccggaaagtcgtttgacatccgcacg
ttgccgcttgatgatgaaaaaacgtacgcgctgcttggcgctggagatacaaatggcatt
tttcagctcgaatcaagcgggatgaagcgcgtgctcgccgagctgcggccgtctgagttt
gaagatgtcgtcgccgtcaatgccttgtatcggccggggccgatgcaaatgatccccgtt
tacatccggcgcaagcgcggcgaggagccgattgaatacatccatcctgaccttgcgccg
attttagcgccgacatacggggtattgatctatcaagagcaaattatgcaaatcgccgcc
cggcttgccggattttcgctcggacaagcggacgtgcttcgccgggcggtggcgaaaaaa
gagaaagcgctgcttgccaagcagcgtcaggcgtttgtcgccggctgcgtggcgaacggc
tatccgaaagcagtcgccgaggaactgtaccgacacatcgtccgctttgccgattacggc
ttcaaccgaagccacgcggtcagctatgcgctgttgtcgtatgcgatggcgtatatgaaa
gctcattacccgctttgtttttatgcggtcatgctcaccaatgcctccggcgaccgagaa
aaagcggcggtgtactattgggaggcggcgcgaaaagggatcaacgtccttttgccgtcg
gtcaacaaaagcgtttttcgctcttttgtggaggggagcgccattcgccttgggctcgcg
atggtgaagcaagtcggctcggcggcgaagctgattgtcgaggagcggaaagcgaacgga
ccgtttgccgacttctttgatttcgctgctcgcttgctgccaaaagggctcgggcgcccg
gcgctcgaggcgctcatttccgttggggcgtttgacgagttcggtgcagatcgggcttcg
cttcttgccagcattgacattgcgatcgaacatgcgcaatgggttcaggcgctgcaagcc
ggagggctgtcgttaaaaccgaaatatgctgccgcacattcgtggcctttgtccgaacgg
cggcggcgggaagcggagtttcttggcttcgccgtcaccccccatccggcggcggtgtgc
cgcccgttgctgcaagcggcgggggcggtgtgtgttgccgatgtgcaaggtccgtcaact
gtggttgggggagcggtcgtccgcatacggaaaacgaggacaaagcagggtgaagaaatg
gcgtttttcaccgtcggcgatgagagcggggaattggaggcggtggcgtttccgaacgtt
taccgccgcgcggcggacgtattgaaagaaggacagtttgtattgcttgccggaatgatt
gaggtgcgcggcggacggcgtcagctcatcattcgccgcgccgagcgcctgctcgtgtca
gcgctgtatattaacgcaggccatgcgctatcggacggaccgcggcttgcggcgttgaag
cagctgctcgaacaacaccacggaagcattccggtttatttatacgacgaagcgaagcgg
aagcttctccgcctgccggaacggtatgcggttgacttcaccgcgccgcttgtcgacgaa
ttgctctctctattcggtgctgggcgcgtcgctgtcaaataa
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