Geobacillus sp. JS12: A0V43_12075
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Entry
A0V43_12075 CDS
T04412
Name
(GenBank) 16S rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
gej
Geobacillus sp. JS12
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gej03009
]
A0V43_12075
Enzymes [BR:
gej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
A0V43_12075
Ribosome biogenesis [BR:
gej03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
A0V43_12075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
NA-iREase3
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AMQ21500
UniProt:
A0A142D398
LinkDB
All DBs
Position
complement(2468519..2469265)
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AA seq
248 aa
AA seq
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MELRIDKLLAHMGYGTRKEVKKLLKSGAVKVDGAPVRDAKTKVRPDEQIVTVWGETVEYK
PFIYLMMNKPSGVVSATEDAVEETVVDLLEEEDRAFSPFPVGRLDKDTEGLLLLTNDGQL
AHQLLSPKKHVPKTYFAVVDGEVTEADVAAFQRGVVLDDGYETKPAKLVVLKSGLRSDVE
VTITEGKFHQVKRMFQAVGKRVVYLKRIQMGPLALDTDLAVGEYRELTDEEVNMLKQYRP
ETDEKKGT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggagctgcgcattgacaagctgctcgcccatatggggtatgggacgaggaaggaagtg
aaaaagctgctcaagtccggagcggtgaaagtggacggcgcgccggttcgtgatgcgaaa
acgaaagtgcggccggatgagcaaatcgtgaccgtttggggagaaacggtcgagtacaag
ccattcatttacttgatgatgaataagccttcgggggtcgtttccgcgacggaagatgcc
gtggaagagacggtcgtcgatttgcttgaagaagaagaccgggcattttccccgtttccg
gtcgggcggcttgacaaagatacggaagggctgctgctcttgacgaatgacggccagctc
gcccatcaactgttgtcgccgaaaaaacacgtgccgaaaacgtattttgccgtcgtggac
ggggaagtgacggaagcggatgtcgcggcgtttcagcgcggcgtcgtccttgatgacggc
tatgaaacaaagccggccaagctcgttgtgttgaaatccggccttcgttccgatgtcgag
gtaacgatcaccgaagggaagttccatcaagtgaagcggatgttccaagcggtcggcaag
cgggtcgtctatttaaaacgaattcaaatggggccgctcgcccttgacacggatttggcc
gtcggcgagtatcgggaattgacggacgaagaggtgaacatgttgaagcaataccggcca
gagacggacgaaaaaaaaggaacctga
DBGET
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