Geobacillus sp. JS12: A0V43_15175
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Entry
A0V43_15175 CDS
T04412
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gej
Geobacillus sp. JS12
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gej03032
]
A0V43_15175 (gyrB)
03400 DNA repair and recombination proteins [BR:
gej03400
]
A0V43_15175 (gyrB)
Enzymes [BR:
gej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A0V43_15175 (gyrB)
DNA replication proteins [BR:
gej03032
]
Prokaryotic type
DNA Topoisomerases
A0V43_15175 (gyrB)
DNA repair and recombination proteins [BR:
gej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A0V43_15175 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AMQ21996
UniProt:
A0A142D4P4
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All DBs
Position
3098339..3100261
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AA seq
640 aa
AA seq
DB search
MTMEQRVEQTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGY
CTNIDVTIGKDNSITVADNGRGIPVDIHEATGRPAVEVIMTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSEWLEVYVYRDGKIHYQRYERGEPCTDLQVIGETDRTGTTTRFKPDPEI
FTETTEFDYETLATRLRELAFLNRGLKITLTDERVDSRKNEYVYEGGIRSYVRHLNRTRE
VLHEEPIYIAGERDGIAVEIALQYNDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIIN
DYARKQQIFKENDANLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSDARTVTDAVFS
EQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLPGKLADCSSRD
PSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITAL
GTGIGEEFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRELIEHGYIYIAQPPLY
KIEQGKQVRYAYNDRQLEKILAELPDQPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQ
VSLQDAIDADETFEILMGDKVEPRRQFIEENARYVKNLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggaacaacgggttgagcagacgtacgatgcaagccaaatccaagtgcttgaa
ggccttgaagcggtccgcaagcgcccggggatgtacatcggctcgacggggccgaaagga
ctgcaccatctcgtttgggaaatcgtcgacaacagcatcgacgaggcgttggcgggctat
tgcacaaacatcgatgtgacgatcggcaaagacaacagcatcaccgtcgccgacaacggg
cgtggcattccggttgacattcacgaggcgaccgggcgtcccgccgtcgaagtcattatg
accgtccttcatgccggtgggaaatttggcggagggggctataaagtgtccggcggcttg
cacggcgttggcgcttcggtcgtcaacgccttatcggaatggctcgaagtgtacgtctat
cgggatggaaaaatccattaccagcggtacgagcgcggagaaccgtgcaccgacttgcaa
gtcatcggcgagacagaccggaccggaacgacgacccgttttaagccggacccggaaatt
ttcactgagacgaccgaatttgactatgaaacgctggccactcggttgcgtgagctcgcc
tttctaaatcgcggcttaaaaatcacgctgacggacgaacgggttgacagccgaaaaaac
gaatatgtttacgaaggcggcattcgttcatacgtccgtcatttgaaccgaacacgagaa
gtgctgcacgaagagccaatttatatcgctggcgagcgtgacggcattgccgtagaaatc
gccttgcagtacaacgacggctatacgagcaatatttattcgtttgtcaacaacattcat
acgcatgaaggcggcacacatgaatctggctttaaaatggcgctgacgcgcattatcaat
gattacgctcgcaagcagcaaatttttaaagaaaacgacgcgaatttgactggcgaagat
gtgcgcgaagggctgacggccatcgtgtcgatcaagcatccatcgccgcagtttgaaggg
caaacgaaaacgaagctcggcaacagcgatgcgcgcacggtgaccgacgctgtcttttcc
gaacaatttgaaacgtttttgcttgaaaatccgacgattgcccgaaaaatcgtcgaaaaa
ggcatgatggcggcgcgagcgcggctggcggcgaaaaaagcgcgcgaactgacgcggcgc
aaaagtgcgcttgaaatttccaatttgccgggcaaactggctgactgttcgtcaagagac
ccgtcgatcagcgagctgtacgtcgtcgagggcgattcggccggcggctccgcgaaacag
gggcgcgaccgccatttccaagcgattttgccgctgcgcgggaaaatccttaacgtggaa
aaagcgcgcttggacaaaattttgtcgaacaatgaggtgcgggcgattattaccgccctt
ggcacgggcattggcgaagagtttgacatctcaaaggcgcgttaccataaggtcatcatc
atgactgacgccgatgttgacggggcccatattcgtacgcttcttttaacatttttttac
cgttatatgcgggaattgattgaacacggctacatttatatcgctcagccgccgctgtat
aaaatcgagcagggaaaacaggtgcgttatgcttacaacgaccgccagcttgagaaaatc
cttgctgagctgccggaccagccaaaaccgacgattcaacgctataaaggactgggcgaa
atgaatccggagcaactttgggaaacgacgatgaatccggaaacgagaacgttgctgcaa
gtgagcttgcaagacgccattgacgcagatgaaacgtttgaaattttaatgggcgataaa
gttgagccgcgccgccagttcatcgaagaaaatgcccgttatgtgaaaaacttggacatt
tag
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