Geobacillus sp. JS12: A0V43_16135
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Entry
A0V43_16135 CDS
T04412
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gej
Geobacillus sp. JS12
Pathway
gej03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A0V43_16135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gej03021
]
A0V43_16135
03400 DNA repair and recombination proteins [BR:
gej03400
]
A0V43_16135
Enzymes [BR:
gej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A0V43_16135
Transcription machinery [BR:
gej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A0V43_16135
DNA repair and recombination proteins [BR:
gej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A0V43_16135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMQ22136
UniProt:
A0A142D534
LinkDB
All DBs
Position
3278885..3279829
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELSEDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIDGVVEDVTAIILNIKKLALKIYSDEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLHIATLAEGGRLRMRMTAKRGRGYVPAEANKREDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQVTDYDKLTIDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAQNAEIMVEK
EDDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEDMMKVRNLGRKSLEEVK
AKLAELGLSLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccgaaaattgaaacggtcgaactgagcgaagatgccaaatat
ggcaaattcgtcgtcgaaccgcttgagcgtggatatggtacaaccttagggaactccttg
cgtcgtatcctattgtcttcactccctggtgcagctgtaacatcggtgcaaatcgacggc
gtcttgcatgagttttcaacgattgacggcgtcgttgaagatgtgacagctatcattttg
aatatcaaaaaactagcgttgaaaatttattcagacgaagagaaaacgttggagattgat
gtgcagggtgaaggagttgtcacggctgccgatatcactcacgacagcgatgtagaaatt
ttaaacccggaccttcatatcgcgacgctggcggaaggcggccgcctgcgcatgcgcatg
accgccaagcgggggcgcggatatgttcctgctgaggcgaataagcgcgaagaccagccc
atcggcgtcattccgatcgattccatttatacgccggtctcccgagtttcctatcaagtc
gagaatacaagggtcggccaagtgacggactatgacaagctgaccattgatgtgtggacg
gatggaagcatcgggccgaaagaggccatttcccttggagcgaaaattttaacggagcac
ctgaacatttttgtcggcttgacggatgaggcgcaaaatgcggagatcatggtggagaaa
gaggacgatcaaaaagaaaaagtgctcgaaatgacgatcgaggaactcgatctttcggtt
cgttcctacaattgcttgaagcgagccggcatcaacactgttcaagaactgacgcaaaaa
acggaagaagatatgatgaaagtgcgcaacctcggccgcaagtcgcttgaggaagtgaaa
gcgaaactggctgagcttggcctcagcctgcgcaaagacgactaa
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