Geobacillus sp. JS12: A0V43_17210
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Entry
A0V43_17210 CDS
T04412
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gej
Geobacillus sp. JS12
Pathway
gej03420
Nucleotide excision repair
gej03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0V43_17210
03430 Mismatch repair
A0V43_17210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gej03400
]
A0V43_17210
Enzymes [BR:
gej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0V43_17210
DNA repair and recombination proteins [BR:
gej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0V43_17210
MMR (mismatch excision repair)
Other MMR factors
A0V43_17210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Terminase_6N
SUIM_assoc
Motif
Other DBs
NCBI-ProteinID:
AMQ22687
UniProt:
A0A142D6N5
LinkDB
All DBs
Position
3476050..3478224
Genome browser
AA seq
724 aa
AA seq
DB search
MNFLSEKLLAHLNKEQQEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKQVAPWNIL
AITFTNKAAREMKERVQALLGGAAEDVWISTFHSMCVRMLRRDIDRIGINRNFSILDPTD
QLSVIKAILKDKNIDPKKFEPRTILATISGAKNDLLTPEQFAKRASTYYEKIVGDVYQEY
QQRLLRNHSLDFDDLIMTTIHLFDRVPDVLQYYQYKFQYIHIDEYQDTNRAQYTLVKKLA
ERFQNICAVGDADQSIYRWRGADIRNILSFERDYTNAKVILLEQNYRSTKRILQAANEVI
AHNVNRKPKRLWTENPEGKPIVYYEAMNEVDEAQFVARRIQEAVESGERRYRDFAVLYRT
NAQSRVIEEMFLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKR
GIGASTIDKLVRYAAEHELSLFEALGELEMIGFSTKTAGALAAFRRQLEQWTQLQEYVPV
TELVEEVLDQSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLIAFLTDLAL
ISDLDELNGTDQAAEGDAVVFMTLHAAKGLEFPVVFLIGMEEGIFPHLRSLENEDEMEEE
RRLAYVGITRAEEELVLTNAQMRTLFGNIQMNRPSRFLDEIPAHLLETVSRGKPSVSRSA
SARLQAGGAIGVWKVGDRANHRKWGIGTVVSVRGEGDDQELDIAFPSPIGIKRLLAKFAP
IEKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttatcggaaaagctgcttgcgcatttaaacaaagagcagcaagaagccgtt
aaaacgacagaaggcccattgctcatcatggcgggagcgggcagcggaaaaacgcgcgtg
ctgacgcaccggatcgcctatttgatggcggaaaaacaggtggcgccgtggaatatttta
gccattacgtttacgaacaaagcggcgcgtgaaatgaaggagcgggtgcaggcgctctta
ggcggggcggcggaagacgtgtggatttcgacgttccattcgatgtgcgtccgcatgctg
cgccgcgacattgaccgcatcggcatcaatcgcaatttttccatccttgacccgacggat
cagctttcggtcatcaaagcgattttgaaagacaaaaatatcgatccaaaaaaatttgag
ccgcggacgattttagcgacgatcagcggggcgaaaaacgatttgctcacgcccgagcaa
ttcgcgaagcgggcatcgacgtactacgaaaagatcgtcggcgacgtgtatcaagagtat
caacagcgccttctccgcaatcattcgctcgatttcgacgatttgatcatgacgacgatc
cacttgtttgaccgcgtgccggatgtgcttcaatattaccagtataagttccagtacatc
catatcgatgagtaccaggatacgaaccgcgctcaatatacgctggtgaaaaagctcgca
gagcggttccaaaatatttgcgccgtcggcgatgccgaccagtcgatttaccggtggcgc
ggggcggacattcgcaacattttatcgtttgagcgcgactacacgaacgcgaaagtcatt
ttgcttgaacaaaactaccgctcgacgaaacgcattctgcaggcggcaaatgaagtcatt
gcgcataacgtcaatcgaaagccaaagcggttgtggacggaaaacccggaagggaagccg
atcgtctattatgaagcgatgaacgaagtggacgaagcgcaatttgtcgcccgccgcatt
caagaggcggttgagagcggggagcgccgctaccgcgattttgccgtgctttatcggacg
aacgcccagtcgcgcgtcatcgaggaaatgtttttaaaagcgaacattccgtaccaaatc
gtcggcggcttaaagttctatgaccggaaagaaattaaagacattctcgcttacttgcgc
gtcatcgccaaccccgatgacgatttgagcttgcttcgcatcatcaacgtgccaaagcgc
ggcatcggcgcctctacgatcgacaaattggtccgctatgcggccgagcatgagctgtcc
ttgtttgaagcgctcggcgagctggagatgatcggcttcagcacgaagacggccggggcg
ctcgccgcgtttcgcagacagcttgagcaatggacgcagctgcaagaatacgttccggtg
acggaacttgtggaggaagtgctcgaccaatcgggctaccgcgagatgctcaaggcggaa
cggacgattgaagcgcaaagccggcttgagaacttggacgagtttttgtcggtgacaaag
cattttgaaaatgtgagcgacgataaatcgctcatcgcctttttaaccgacttggcgctc
atttctgatttggacgagctgaatgggacagatcaggcggccgagggcgatgccgtcgtc
ttcatgacgctgcacgccgccaaagggcttgagtttccggtcgtgtttttgattggcatg
gaagaaggcatttttccgcatcttcgttcactggagaatgaggatgaaatggaagaagag
cggcggctggcgtatgtcggcatcactcgggccgaggaagagctcgtattgacgaacgcg
caaatgcggacgctgtttggcaacatccaaatgaaccggccgtcgcgctttttagatgag
attcccgcgcatttgctggagacagtctcgcgcgggaaaccgtctgtttcccgttcagcg
tccgctcgcttgcaggcaggcggcgccatcggggtgtggaaagtcggcgaccgggcgaac
catcggaaatggggaatcggtacggttgtcagtgtccgtggcgaaggtgacgaccaagaa
ctcgacatcgccttcccgagcccgatcggcattaaacggctgcttgccaaatttgcgccg
attgagaaagtatag
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