Gelria sp. Kuro-4: kuro4_09090
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Entry
kuro4_09090 CDS
T07432
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gek
Gelria sp. Kuro-4
Pathway
gek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
kuro4_09090 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gek03400
]
kuro4_09090 (recD2)
Enzymes [BR:
gek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
kuro4_09090 (recD2)
DNA repair and recombination proteins [BR:
gek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
kuro4_09090 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
HHH_2
Helicase_RecD
HHH
AAA_29
UvrD-helicase
HHH_8
AAA_22
SLFN-g3_helicase
AAA_28
AAA_25
NTPase_1
NPHP3_N
MeaB
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BCV24136
UniProt:
A0A9C7BFA9
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All DBs
Position
899096..901318
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AA seq
740 aa
AA seq
DB search
MQETAGQPAGEATLTGEVKAIVFRNPTSGYTVAALKCPQGEVRVTGHLATVRAGGRYVFY
GDWVCHPKYGQQFAAGALEEIVPAEEEGIVGYLASGLIPGVGERLARRLVEHFGTDTLKV
ISEEPARLVQVPGVGKKLAGKIARSVNEHKDVERLMVFLRHHHVSTSLALKIHRRYGREA
IARLKDNPYALTDDIFGVGFLTADRLACELGLRRHAPERLTAAALYALRQAATRAGHCYL
PAQELVAETLKLVNAPGEEEPVEEDEVQAALAGLSQRSPEVVVEGDRFWLPYLYQAERGV
ARELQRLLKAERRVPPAKLEAAIRRAAAELGLTFAPAQELALRQGVLQGVTVLTGGPGTG
KSTIVSGLIRVLSELEPGVRILLAAPTGRAAQRLTDLTGCEASTIHRLLGYTLAEGEPTF
TYNSENQLKADLVIVDEFSMVDVLLAYQLFQAVPTACRLVLVGDKDQLPSVGAGSVLRDI
IASDLVPTVRLTQIFRQAEQSLITVNAHRINQGQGLVLKPASDFYFLRSEDPEETVRTVL
DLAGRMVGTFGLENVQVLAPMHKYVTGVQNLNKLLQEKLNPAAPGKKEYPFRDGFFRTGD
KVMAVRNNYDKGVFNGNQGRVVDVILAREDEDVEEDTLLVDFDGLLVPYGRSELDELTLA
YAATVHKAQGSEFSCCIFVLSTQHWYMLQRNLLYTGVTRGKELVMLVGSRRALVRAVANS
TVQERYTALDERLRGAGVAQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagacggccggccaaccagccggcgaggccaccctaaccggcgaggtcaaggcg
attgttttccgcaaccctacctcgggctacacggtggcggcgctcaagtgcccgcagggg
gaagtacgcgtaaccggtcacctggccacggtgcgcgcaggtggccgctacgttttttac
ggcgactgggtgtgccaccccaagtacgggcagcagttcgccgccggcgcgctggaggag
attgtgccggcggaggaggaagggattgtcgggtatctcgccagcgggctcatccccggg
gtgggtgagcgcctggcccggcggctggtggaacactttggcacggataccctcaaggtg
atcagcgaggagccggcgcggctggtgcaggtaccgggggtggggaaaaagctcgccggc
aagattgcccgctccgtgaatgaacataaagacgtagagcgcctcatggtctttttgcgc
caccaccacgtcagcaccagcctggccctcaagatccaccgccgttacgggcgggaggcc
attgcccgcctgaaggacaacccctacgccttaaccgacgacatctttggggtggggttt
cttaccgccgaccgcctggcctgcgagctgggcctgcgccggcacgcaccggagcgcctc
accgcggccgccctatatgccctgcgccaggcggcgacccgtgccgggcactgctacctg
ccggcgcaggaactggtggcggagacgctgaagctggtgaacgcgcccggcgaggaggag
ccagtggaggaagacgaggtgcaggccgccttggccggtttaagccagcgctcacccgag
gtggtggtggaaggcgaccgcttctggctgccctacctctaccaggcggagcggggcgtg
gcccgggaactgcagcggctgctgaaggccgagcggcgggtgccgcctgccaagctggag
gcggccatccgccgggcggcggccgaactggggctcacctttgccccggcccaggagctg
gcgctgcgccagggggtgctccagggggtgaccgtgctcaccggcggccccggcaccggc
aaatccaccattgtcagcggcctcatccgcgtgctctccgagctggagccgggcgtgcgc
attctcctggcggcgcccaccgggcgggcggcgcagcggctgaccgaccttaccggctgt
gaggccagcaccatccatcgtctcctgggttacaccctggccgagggcgagcccaccttt
acgtataacagcgaaaaccagctgaaggccgacctcgtcatcgtcgatgagttctccatg
gtggatgtccttttggcctaccagcttttccaggccgtgcccaccgcctgccggctggtg
ctggtgggggacaaggatcagctgccgagcgtcggggcgggcagcgtccttagggacatc
atcgccagcgacttggtgcccaccgtgcgcctcacccagatcttccggcaggccgagcag
tcgctcatcaccgtgaacgcccaccgcatcaaccaggggcagggtttggtgctgaagccg
gcctccgacttttacttcctgcgctctgaggaccccgaagaaacggtgcgcactgtgctc
gatctggccggccgcatggtgggtaccttcgggctcgagaacgtccaggtgctggccccg
atgcataagtacgtcaccggcgtgcaaaacctgaacaaactgcttcaggagaagctcaac
ccggctgcgccgggcaagaaagagtaccccttccgcgatggcttctttcgcaccggcgac
aaggtgatggccgtgcgcaacaactacgacaaaggggtcttcaacggcaaccagggccgc
gtggtggacgtgatcctggcgcgtgaagacgaggacgtggaggaggacaccctgctcgtt
gactttgacgggctgcttgtcccttacggccgctccgaactggacgagctcaccttggcc
tacgccgccaccgtgcacaaggcacaggggagcgagttttcctgctgcatttttgtcctc
agcacccagcactggtacatgctgcagaggaacctcctctacaccggggtgacgcgcggc
aaggagctggtcatgctggtcggcagtcgccgcgccctcgtgcgcgccgtggccaacagc
accgtgcaggaacgctacaccgccctggacgagcgcctgcgcggagccggtgtcgcacaa
taa
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