Gelria sp. Kuro-4: kuro4_10430
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Entry
kuro4_10430 CDS
T07432
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gek
Gelria sp. Kuro-4
Pathway
gek03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gek00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
kuro4_10430 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gek03021
]
kuro4_10430 (rpoC)
03400 DNA repair and recombination proteins [BR:
gek03400
]
kuro4_10430 (rpoC)
Enzymes [BR:
gek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
kuro4_10430 (rpoC)
Transcription machinery [BR:
gek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
kuro4_10430 (rpoC)
DNA repair and recombination proteins [BR:
gek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
kuro4_10430 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
BCV24270
UniProt:
A0A9C7EQK2
LinkDB
All DBs
Position
1056920..1060396
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AA seq
1158 aa
AA seq
DB search
MLDANNFDRIRIGLASPDQIRAWSRGEVKKPETINYRTLKPEREGLFCEKIFGPTKDWEC
HCGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDM
SPRALEKVLYFAAYVVVDPGDTPLVKKQILSESEYREARDKYGARFTALMGAEAIKMLLE
EIDLEQLAAELRQELKDVSGQRKIRAIRRLEVVEAFRKSGNRPEWMILDVIPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELQAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRSLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKLHQCGLPKE
MALELFKPFVMKKLVSEGYANNIKSAKRMVERVRDEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIQIHPLVCSAYNADFDGDQMAVHVPLSAEAQAEARVLMLSAYNIL
SPANGKPLAVPTQDMVIGCYWLTSVKEDAKGAGRLFASVDEAQMAADAGYLSLQAPIKVR
LDGKLTETTLGRVLFAQALPEDMRYHLNEVQDKKALGKIVAECYHRHGVETTVEMLDRIK
ALGYHYATRAGVTISVSDIEVPTDKKEILTEAEREVEEVESQYRHGLITAEERYQSVVDI
WNGATEKVTQSMVRHLDRFNPVFMMANSGARGNIQQLRQLAGMRGLMADPSGRIIDLPIR
SNFREGLTVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDLIVREEDCGTTDGL
VVTDMMDGNEVIQSLYDRILGRVAVEDVVHPETGEVLVPAGEEIREDAAGAIVKAGIKAV
KIRTVLTCASKLGVCAKCYGRSPATGRLVDMGEAVGIVAAQSIGEPGTQLTMRTFHTGGV
AGDDITQGLPRVEELFEARRPKGQAIITEIDGTVHLGENRGRREATVVNEETGETRSYAL
PFGARLHIKDGDKVAAGDQLTEGPVNPHELLRIKGIEAVEQYLLQEVQRVYRFQGVEIND
KHIEVIVRQMLRKVKVEDPGDTDLLLGSLVDVQEFEDANARVLEAGGEPATARPTLLGIT
KASLATESFLSAASFQETTRVLTEAAIKGKTDPLLGLKENVIIGKLIPAGTGMARYRSAK
VEPVPSPAVPAAQELAGR
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ttgctagacgccaacaactttgaccgcatccggatcgggctggcctctccggaccagatc
cgcgcctggtcccggggcgaggtgaaaaagccggagaccatcaactaccggaccttaaag
cccgaacgggagggcctgttctgcgagaaaatcttcggtccgaccaaagattgggagtgt
cactgcggcaagtataaacggattcgctacaagggcatcgtctgcgaccgctgcggcgta
gaggtcacgcgggccaaggtgcggcgcgagcgcatgggccacatcgagctggcggcgccg
gtgtctcatatctggtacttcaagggcatcccgagccgcatggggctcatcctggacatg
tcgccgcgggctctggaaaaggtgctctactttgcggcctacgtggtggtggatcccggg
gatacccccctggtgaaaaagcagatcctctccgagagcgagtatcgcgaagcgcgggac
aagtacggggcgcgttttaccgccctcatgggcgcagaggccatcaagatgctgctcgag
gagatcgacctggagcagctggcggctgaactgcgccaggagctgaaggacgtaagcggc
cagcgcaagatccgcgccatccgccgcctggaggtggtggaggccttccgcaagagcggc
aaccgccccgaatggatgatcctggatgttatcccggtgatcccgccggagctgcgcccc
atggtgcagctcgacggcggccgcttcgccacctcggacctcaacgacctctaccggcgg
gtcatcaaccgcaacaacaggttgaaacggctgctcgagctgcaggcgccggatatcatc
gtgcgcaacgagaaacgcatgctgcaggaggcggtggacgccctcatcgacaacgggcgc
cgcggccgcccggtgaccggccccggcaaccggtccttgaagtccctgagcgacatgctc
aagggtaagcaggggcgcttccgccagaacttactcggcaagcgcgtggactactcaggc
cgttcggtgatcgtggtgggcccgaacctgaagctgcaccagtgcggcctgcccaaggag
atggcgctggagctctttaagcccttcgtcatgaagaagctggtgagcgagggctacgcc
aacaacatcaagagcgccaagcgcatggtggagcgcgtccgcgacgaggtctgggacgtg
ctggaggaggtcatccgggagcacccggtgctcctgaaccgcgcgcctaccctgcaccgc
ctcggcatccaggcctttgagccggtgctggtggagggccgcgccatccagattcacccc
ctggtctgctcggcctacaacgccgacttcgacggcgaccagatggcggtacacgtaccg
ctttcggccgaggcccaggcggaagcgcgggtgctcatgctctcagcttacaacatcctg
tccccggccaacgggaagcccctggcggtgcccacccaggatatggtcatcggctgctac
tggctgaccagcgtgaaggaagacgccaaaggcgccggccgcctgttcgcctcggtggac
gaagcccagatggccgccgacgccgggtatctttccctgcaggcgccgattaaggtccgc
ctggacggcaagctcacggaaaccaccctggggcgcgtgctctttgcccaggcgctgccg
gaggacatgcgctaccacctcaacgaggtacaggacaaaaaagccctgggcaagatcgtg
gccgagtgttaccaccgccacggcgtcgagaccacggtggagatgctggaccgcatcaaa
gccctgggctaccactacgccacccgcgccggcgtcaccatctccgtgagcgacatcgag
gtgcccacggacaaaaaggagatcctgacggaggcggagcgcgaggtggaagaggtcgaa
agccagtaccgccatggcctcatcaccgccgaggagcgctaccagagcgtggtggacatc
tggaacggcgccacggaaaaggttacgcaatccatggtgcgccatctggacaggttcaac
ccggtgttcatgatggccaattccggtgcccgcggtaacatccagcagctgcggcagctg
gccggcatgcgcggcctgatggccgacccttccgggcgcatcatcgaccttcccatccgc
tccaacttccgcgagggcctgaccgtactggagtacttcatctccacccacggcgcccgc
aagggcctggcggacacggcgcttcgcaccgccgactccggttacctgacccgccgcctg
gtggacgtctctcaggatctcatcgtccgcgaggaagactgcggcaccaccgacggcctg
gtggtcacggacatgatggacggcaacgaggtcatccagtccctctacgaccgcatcctg
gggcgcgtggcggttgaagacgtggtgcacccggagacgggcgaggtcctggtgccggcc
ggggaggagatccgcgaggacgccgccggtgccatcgtcaaggcgggcatcaaggcggtg
aagatccgcaccgtcctcacctgcgcctccaagctgggtgtgtgcgccaagtgctacggc
cgcagccccgccaccgggcgcctggtggatatgggcgaggccgtggggatcgtggcggcg
cagtccatcggcgagccgggcacgcagcttaccatgcgtaccttccacaccggcggcgtg
gccggcgacgacatcacccagggtctgccgcgcgtggaagagctgtttgaagcccggcgg
ccgaaaggccaggccatcatcaccgaaatcgacggcacggtgcacctgggcgagaaccgc
ggccggcgtgaggccacggtggtcaatgaagagaccggcgagacccgctcctacgccctc
cccttcggcgcgcgcctgcatatcaaggacggcgacaaggtggcggcgggcgaccagctc
accgaaggcccggtgaacccccacgagctgctgcgcatcaagggcatcgaagccgtggag
cagtacctcctgcaggaggtgcagcgggtgtaccgcttccagggcgtggagatcaacgac
aagcacatcgaggttatcgtgcgccagatgctccggaaggtaaaggtggaggacccgggg
gatacagacctgcttttggggagcctggtagatgtgcaggagttcgaggacgccaatgcc
cgggtgctggaagccggcggcgaaccggccaccgcgcggcccacgctcctcggcatcacg
aaggcgtccttggccaccgagtcattcctctcggcggcttccttccaggaaaccacccgc
gtgctcaccgaagcagccattaaaggaaaaacagacccgctgctgggcctgaaggagaac
gtgatcatcggcaagctcatcccggccgggacgggcatggcgcgctaccgcagcgccaag
gtggaaccggtcccgtctccggccgtgccggcggcccaggagctggccgggcgctga
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