Gelria sp. Kuro-4: kuro4_11060
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Entry
kuro4_11060 CDS
T07432
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gek
Gelria sp. Kuro-4
Brite
KEGG Orthology (KO) [BR:
gek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gek03400
]
kuro4_11060 (addB)
Enzymes [BR:
gek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
kuro4_11060 (addB)
DNA repair and recombination proteins [BR:
gek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
kuro4_11060 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BCV24333
UniProt:
A0A9C7BBA9
LinkDB
All DBs
Position
1105012..1108509
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AA seq
1165 aa
AA seq
DB search
MGDKASVRFILGRAGAGKTYTCLKAIEGELLRAGEDGPPLILLVPEQAAFQMEYELLARG
QIAATARAQVLSFRRLARRVLGEVGGGARPWLGELGKRMVLRALIQRHRGELRLFAKSAA
TAGFTERLAGTLAELKLYNISPEMLGRRLAALTAAGMGESPLAGKLHDLALLYRELEDFL
APRYTDPEGYLTFLAARLPQAPSLQQARVWVDGFSGFTPEEFQVLAALLQTAARVEVTLC
LDAGELNRPLVETDLFHPTRETYVKLRDLAVAAGARLEPPLVLDDPQALPPRFAHARELA
HLERCFFRYPTAAWSRPAPGLSLVAAANRRTEVEAAARRIISLAREEGLRWREMALVVRD
LELYHDLVATVFADHGIPCFIDRKRPVLHHPLAQLALAALEVVTSNWSYEAVFRCLKTDL
FPLSRPEVDRLENYVLAFGVRGATWQRPQDWDFPARAGGGRNAGAAPWEGVDDLRRQVAA
CLAPLTSACRRGEKVSAAALTAALWHFLDGLKVGETLAGWAKEAEARGDLAAAQEHSQVW
TRFLELLDELVIGLGDTPLTPEEYGEILASGLESLRLGLVPPSLDQVLVGGLERSRHPNV
RAAFVLGVSDGVLPGRVSEDAVFTDREREELRAAGLELAPTSRQRQLHEQYLTYIALTRA
GERLWVSFPLADEEGRALAPSRIITRLRELFPAALETYAASEPSGAVAEDLAFLTSPARA
AAYLAGQLRLARAGRPLSPLWRAVQRHLLAAPALRALAEKATAGLNHRNQVGPLPASLAR
RLYGSPLRTSVTRLEEFASCPFSHFAVHGLRLAERAEFGLDLPSLGLFTHGILRAVTGRL
LSAGRDFASLSGEEAAALVASEVERALPAFAGGVLVSSPRYIYLARRLTRLLSGAVEILA
EQARRGAFRTRAAELKFGLPGAAPGLTFILPDGEQFALVGQIDRLDVAAVEGRTYIRIVD
YKSSPRRLALAEVYHGLSLQLLVYLLAALALGADLGLKEPVPAGVFYFTLGERFLRTRGP
LPPQEAAARLLKEFRLEGLVRGEAEAVKLLDKGAAAGEAAVVAAALKKDGTPRQQAGTVP
AAGFDTLLAFVRCKVTELAARALAGEVAAAPAKQGNATACQCCGLHAACGFDPLLAGNSY
RLLSRLQPEQLWRRLEAAVKEGEQA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgggagataaggccagcgtgcgctttattctcgggcgggcgggagcaggcaaaacctac
acctgccttaaagccatcgaaggggagcttttgcgcgcgggcgaggacggcccgcccctc
atcctcctggtaccggagcaggcagccttccagatggagtacgaacttttggctcggggg
caaatagcggccacagcccgcgcccaggtgctgagtttccgccgccttgcccgccgtgtg
ctgggggaggtgggcggcggcgcgcggccctggctgggcgagctgggcaagcgcatggtg
ctgcgcgccctcatccaaaggcaccggggtgagctgcgcctcttcgccaaaagcgccgcc
acagccgggttcaccgagcgcctggccgggacgctggcggagctcaagctctacaacatt
tccccggaaatgttgggccggcgcctggcagcgctcaccgcggcagggatgggggagagc
ccgctggcgggcaagctccacgacctggccctcctttaccgggagctggaggacttcctg
gctccccgctacaccgacccggagggctacctaactttcctggctgcccgcctgccgcag
gcgccttcgctgcagcaggcgcgggtgtgggtcgacggcttcagcggcttcacccctgaa
gagttccaggtactggccgcccttttgcagacagcggcgcgcgtggaggtgaccctgtgc
ctggacgccggggaactcaaccggccccttgtggagacggacctttttcaccccacgcgg
gaaacgtacgtcaaactgcgcgacctggcggtcgcggccggggcgcgcctggagccgccg
ctggtcctggatgatcctcaggccctgcccccgcgctttgcccacgcccgcgagctggcc
cacctggagcgctgctttttccgctaccccaccgccgcctggtcgcggccggcacccggc
ctctccctggtggcggcggccaaccggcgcacggaagtggaggcagcggcgcgccggatc
atcagcctggcccgggaggaggggctgcgctggcgggagatggccctggtggtgcgggac
ctggagctgtaccacgatcttgtcgccaccgtgtttgcggaccacggcatcccctgcttc
atcgaccgcaagcgcccggtgctgcaccaccccctggcccagctcgcgctggccgccttg
gaggtggttaccagcaactggtcgtatgaggctgtctttcgctgcctgaaaaccgacctc
tttcccctcagccggccggaggtggaccggctggagaactacgtcctcgccttcggggta
cggggcgccacctggcagcgcccgcaggactgggatttccctgcccgcgccggcgggggc
aggaacgccggggcggccccgtgggaaggggtagacgacctgcgccggcaggtggccgcc
tgcctggccccccttacctctgcctgtcgccgcggcgagaaggtgagcgctgccgccctt
acggcggccctctggcacttcctggacggcctgaaagttggcgaaaccctggcgggatgg
gccaaggaggccgaggcgcgcggtgacctggcggcggcacaggaacacagccaggtgtgg
acccgcttcctggagctactcgatgaactggttatcgggctgggcgacacgccgcttacg
ccggaggagtacggggaaatcctggccagcggcctggagagcctgcgcctgggcctcgtg
cccccgagcctggaccaggtgctggtggggggactggagcggtcccgccaccccaacgtg
cgcgcggcctttgtgctgggcgtaagcgatggggtgctccccggccgcgtgagcgaggac
gccgtcttcaccgaccgggaacgggaggagctccgggcggccggcctggaactggcgcct
accagccggcagcgccaactccacgagcagtacctgacctacattgccctcacccgcgcc
ggcgaacgtctctgggtgagttttcccttggccgacgaggaggggcgggccttggccccg
tcacggatcatcacccgcttgcgtgaacttttccccgccgcgctggaaacgtatgctgct
tccgagccgagcggcgcagtggcggaagacctggcctttcttacttcgccggcgcgcgct
gccgcttatttggcggggcagctccgcctcgcccgggccggccggcccctgagcccgctg
tggcgggcggtgcagcgccatctcctggccgcgccggccctcagggccctggcggaaaag
gccaccgccggcctgaatcaccggaaccaggtagggccgctcccggcatccctggcgcgc
cggctctacggcagccctctgcgcaccagcgtcacacggttggaagagtttgccagctgc
cccttcagccacttcgccgtgcacggcctgcggctggccgagcgggcggagttcggcctg
gacctgccttccctgggacttttcacccacggcatcctgcgcgctgtcaccgggcggctc
ctttcggcaggacgcgactttgcctcgctgagcggcgaagaggcggcggccttggtggcg
tctgaggtggaaagggcgctgccggcttttgccggtggggtcctcgtaagctcaccgcgt
tacatctacctggcccggcgcctcacccgtctcctgagcggagcggtggagatcctggcg
gaacaggcccgccgcggcgccttccgcacccgggcggcggagctcaagttcggcctgccg
ggcgcggcgcccgggcttaccttcatcctgccggacggagagcagttcgccctggtcggg
cagatcgatcgcctcgatgtagccgcggtggaagggcgcacctacataaggattgtggac
tataagagcagcccccggcggctggcgctcgccgaggtgtaccacggcctttccctgcag
cttttggtctacctcctggccgcgctggcgctgggggcggacctggggcttaaggagccg
gtgccggcgggcgttttttacttcaccctgggcgagcgcttcctgcgtacgcgggggccc
ctgccgccgcaggaggcggcggcccggctccttaaggagttccggttggagggcctggtg
cggggcgaggccgaggcggtaaagctgctggataagggagccgccgccggcgaggcggcg
gtggtggcggcggcgctcaaaaaggacgggaccccgcggcagcaggccggtacggtgccg
gcggccggctttgacaccctcctcgcgttcgtgcgctgcaaggtgacagagctggcggcg
agggcgctggccggggaggtggcggccgcgccggcgaagcagggcaacgctactgcctgc
cagtgctgcggcctgcatgcggcctgcggcttcgatccgcttttggcgggaaattcgtac
cggctcctctcccgcctccagccggagcagctgtggcggcgtctcgaggcggcggtgaag
gagggggagcaggcgtga
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