Gelria sp. Kuro-4: kuro4_13140
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Entry
kuro4_13140 CDS
T07432
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gek
Gelria sp. Kuro-4
Pathway
gek03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gek00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
kuro4_13140
09124 Replication and repair
03420 Nucleotide excision repair
kuro4_13140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gek03021
]
kuro4_13140
03400 DNA repair and recombination proteins [BR:
gek03400
]
kuro4_13140
Enzymes [BR:
gek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
kuro4_13140
Transcription machinery [BR:
gek03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
kuro4_13140
DNA repair and recombination proteins [BR:
gek03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
kuro4_13140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-ProteinID:
BCV24541
LinkDB
All DBs
Position
complement(1329201..1330904)
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AA seq
567 aa
AA seq
DB search
MTVNDKPVIVQRDGSILLEVGGPRYEEARDTLARFAELVKSPEYVHTYRLSPLSLWNAAA
SGLSAAAVKEGLSAYSRYPVPDNIMRDIDDYLARYGKLKLVRQGEGLVLISEDPLLITEI
ANSKGLGRHLDGWAGPNRLRVAPGHRGYLKQALIKLGWPVEDLAGYTPGAPLAVDLRTVT
PGGAPFGLRSYQEEAVAAFWASGSERGGSGVIVLPCGAGKTVVGLGVMARARCHTLIVVT
STTAVHQWRDELLDKTTLRPDAIGEYTGDLKDVRPVTIATYQVLTWRPRKTDEFPHLAVF
NARDWGLIIYDEVHLLPAPVFRITADLQARRRLGLTATLVREDGREEDVFTLVGPKRYDV
PWKVLEKQGWIATAACTEIRLPLPQEKRLEYSLARDPHTRYRIAAENPAKLPLVRQLIAR
HPNEQVLVIGQYLDQLAALAAELKAPLITGQTSTAEREALYRAFREGRIKVLVVSRVANF
SIDLPDASVAIQVSGTFGSRQEEAQRLGRILRPKAERNQAHFYTLTTRDTKDQEYAAKRQ
LFLTEQGYRYTILDASEMATGERSRQV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgaacgacaagccggtaatcgtgcagcgcgacggcagcatcctgctcgaggtg
ggcgggccccgctacgaagaggcgcgcgacaccctggcgcgcttcgcggagctcgtgaaa
agccccgagtacgtccatacctaccgcctctcgcccctctccctctggaacgcggccgcc
agcggtcttagcgccgctgccgttaaagaaggtctcagcgcgtactcgcgctacccagta
cccgataacatcatgcgcgacatcgatgactacctggcccgctacggcaagctgaagctt
gtccggcagggtgaggggcttgtgctcatttccgaagacccgctcctcattacggaaatc
gccaacagcaagggcttgggccgccacctggacggctgggcagggccgaaccgcctccga
gtcgcccccggccaccgcggctatctcaaacaggccctgattaaactcgggtggccggtc
gaagatctggcgggttatacgcccggcgccccgctggccgtcgacctgcgcaccgtcacc
cccggcggggcccccttcggcctacgctcctaccaggaagaagccgtggccgccttttgg
gccagcggctccgaacggggcgggagcggcgtgatcgtgctaccctgcggcgccgggaaa
acagtggtaggcctgggcgtcatggcgcgcgcccgctgccacaccctgatcgtcgtcacc
agcaccaccgccgtgcaccagtggcgcgacgaactcctggacaagactaccctccgtccc
gacgccatcggcgagtacaccggcgacctgaaggacgtccgccccgtaaccatcgccacc
taccaggtcctcacctggcggccccgcaagacagacgagtttccccacctggccgtcttc
aacgcccgggactggggccttatcatctacgacgaggtccacctgctgccggccccggtc
tttcgcatcacggccgacctgcaggcgcggcgccgcttgggcctcaccgctaccttggtg
cgtgaagacgggcgggaggaggatgtcttcaccctggtgggccccaagcgctacgatgtt
ccctggaaggtattggaaaaacagggctggatcgccactgccgcctgtaccgagatacgc
ctccccctgccccaggagaagcgcctggagtactctctggcccgcgatccgcatacccgc
taccgcatcgccgctgaaaacccggccaagctccctctggtacgccagttgatcgcccgc
caccctaacgagcaggtgctggtgatcggccagtaccttgaccagctggccgcgctggcg
gccgaactcaaggcgccgcttatcaccggccaaacctccaccgccgagcgcgaggccctc
taccgggccttccgcgaagggcgcatcaaggtgctggtggtgtcgcgcgtggccaacttc
tccatcgaccttccggatgccagcgtggccatccaggtgtccggcaccttcggctcgcgc
caggaagaagcgcaacgcctgggacggatcctccggccgaaggcggagcgcaaccaggcg
cacttctacaccctgaccacccgggacaccaaggaccaggagtatgccgccaagcgccag
ctcttcctcaccgagcagggctaccgctacaccattttggacgcgagtgaaatggcgacc
ggggaaaggagccggcaggtatga
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