Gelria sp. Kuro-4: kuro4_17490
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Entry
kuro4_17490 CDS
T07432
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gek
Gelria sp. Kuro-4
Brite
KEGG Orthology (KO) [BR:
gek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gek03016
]
kuro4_17490 (truB)
Enzymes [BR:
gek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
kuro4_17490 (truB)
Transfer RNA biogenesis [BR:
gek03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
kuro4_17490 (truB)
Prokaryotic type
kuro4_17490 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BCV24976
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All DBs
Position
1757263..1758174
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AA seq
303 aa
AA seq
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MLSGFINILKPPGLTSHAVVARVRRLLGERRVGHAGTLDPAASGVLVVAVGRATRLIAHL
EGSKTYRGEITFGIGTTTLDAEGEITRAVPCSVAAAQLREVLPRFRGTIDQVPPMVSAVH
HQGRRLYELARSGVEVERQPRRVHITRLELISFYPDPLHPRALIECTCSAGTYVRALAAD
IGRALGTEAHLSFLLRTRSGSFALDSSLTLAELEAAVGRGVERTWLCPPESGLGHLAAVT
LPEEESERFRHGNAVFHPSSGGPALGQALVVYGPGRSFLGVGRLEHREEALWLQPDVVFP
KEC
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcgggttcatcaacatcctcaaaccgcccggcctgacgtcccatgcggtggtg
gcgagggtacggcggctcctcggtgagcgccgggtaggacatgcaggcaccctggatcct
gcggccagcggcgtcctggtggtggctgtgggccgggccacccggctcatcgctcacctg
gagggcagcaagacttatcggggcgagataacctttggcatcggcaccacgaccctggat
gccgagggcgaaataacgcgtgcggttccctgttcggtcgctgcggcccagctccgggag
gtactaccacgctttcgcggtaccatcgaccaggtgccgcccatggtttcggccgtgcac
caccaggggcggcggctgtacgagctcgcccgctccggtgtggaggtggagcgtcagccc
cggcgggtacatattacgcgccttgagctcatttctttctaccccgacccgctgcacccg
cgggcgctcattgaatgcacctgttcggccggcacgtatgtgcgggccttggccgcggac
atcggccgggcgctgggaacggaagcccatctttccttcctgttgcgtaccaggagcggg
tctttcgctttggactccagccttaccttggccgaactcgaagcggccgtcggcagggga
gtagagcgcacatggctctgccccccggaaagcgggctggggcacctggcagcggtgacg
ctgccggaggaagaaagcgagcgcttccggcacggcaatgccgtcttccacccaagctcc
ggtggcccggctctggggcaggccttggttgtgtacgggccgggtcgaagctttctgggc
gtggggcgcctggagcacagggaagaggccctttggctccaaccggatgtggttttccct
aaggagtgttga
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