Gelria sp. Kuro-4: kuro4_17540
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Entry
kuro4_17540 CDS
T07432
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gek
Gelria sp. Kuro-4
Pathway
gek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
kuro4_17540 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gek03019
]
kuro4_17540 (pnp)
03016 Transfer RNA biogenesis [BR:
gek03016
]
kuro4_17540 (pnp)
Enzymes [BR:
gek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
kuro4_17540 (pnp)
Messenger RNA biogenesis [BR:
gek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
kuro4_17540 (pnp)
Transfer RNA biogenesis [BR:
gek03016
]
Prokaryotic type
tRNA degradation factors
kuro4_17540 (pnp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
RNB
Motif
Other DBs
NCBI-ProteinID:
BCV24981
UniProt:
A0A9C7B502
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All DBs
Position
1760115..1762223
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AA seq
702 aa
AA seq
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MPEVFQTTLAGRPLSVEIGHVAKQADGAALVRYGDTVVLVTACCSDAPREGIDFFPLTVD
YEERLYAVGKIPGGFIKREGRPSEKAILSARLIDRPIRPLFPKGFRNDVQVIALVLSVDQ
NNSPQIAAMLGTSVALSISDIPFDGPIAGVVVGLVGDELVLNPTIAEQETSRLHLTVAGK
KDAVMMVEAGADEVEEETMLRAIAFGHEAIKELVAFQEEIVAKVGKEKRQALLYRVDPEV
EAKVREYAEPKLLEALATPEKLQREEALDKVEEDAVLSFLEEFPEKEKDIREVVHQLTKE
LVRRMILERHVRPDGRSLEEIRPISVEVGLLPRVHGSGLFTRGQTQVLTSLTLGAVSDEQ
ILDGLGVEESKRFMHHYNFPPFSTGETRPMRAPGRREVGHGALAERALEPMIPAESEFPY
TIRLVSEVLESNGSTSMASVCGSTLALMDGGVPIKAPVAGVAMGLIKEGDNFAVLTDIQG
LEDAMGDMDFKVAGTAAGINALQMDIKVHGITIDILRQALEQARRGRLFILDKMLSVIDR
PRPELSPYAPRMLTMEIDPDKIRDVIGPGGKTIRKIIEETGVQIDIEDDGRVFITAVDEN
AAHRAQEKIKALTRDVVVGEIYVGRVTRLMNFGAFVEILPGKEGLVHISQLARERVARVE
DVVHVGDEVVVKVTEIDRQGRINLSRKEALKAEGKKDKAGSR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaggttttccaaaccacgctggccggccggccgctcagcgtggagattggtcac
gtggccaagcaggccgatggcgcagcgctggtgcgttacggcgacaccgtggtgctcgtt
acggcctgctgctcggatgcgccccgggaaggcatcgactttttccccttgacggtggat
tatgaggaacggctttacgctgtgggcaagattccgggtggtttcatcaagagggagggg
cggcccagcgaaaaagcgatcctttccgcccgcctcatcgaccggccgattcgtcccttg
ttccccaagggattccgcaatgatgtccaggtcatcgcgctggttctttcggtagaccag
aataactcgccgcaaattgctgccatgctgggcacctcggtggcgctttccatctccgac
atccccttcgacggtcccatcgccggggtggtggtgggcctggtgggggacgagctggtg
ctgaatcccaccattgctgagcaggaaaccagccgcctgcatctgacggtggccggtaag
aaggacgcggtcatgatggtggaggccggcgcagacgaggttgaggaggagactatgctc
cgggccatcgccttcgggcacgaggccatcaaggaactggtcgccttccaggaagagatt
gttgccaaggtgggaaaggagaaacgccaggcgcttctttaccgggtggatccggaggtc
gaagccaaggtccgggagtatgcggaaccgaagctcctggaagcgctggccaccccggaa
aagctgcagcgggaagaagcgctggataaggtggaagaggatgcggtgctgagcttcctg
gaggagttccccgagaaggaaaaggacatccgcgaggtggtgcaccagctgacgaaggaa
ctggtgcgcaggatgatccttgagcggcacgtgcgtcccgatggtcgctccctggaggaa
atccgtcccatcagcgtggaggtgggcctgctgccgcgcgtccacggttcggggctcttt
acccgcggccagacccaagtgctgaccagcttgacgctgggggccgtcagcgatgagcag
attctcgacggcctgggggtggaagaatccaaacgctttatgcatcattataacttcccg
ccctttagcacgggtgaaacacggcccatgcgcgctccggggcgccgtgaagtagggcat
ggcgccttggccgagcgtgctctggagcccatgatacccgccgagagcgagttcccctac
accatccgcctggtttcggaggtgctggagtccaacggttctacctcgatggccagcgtg
tgcggcagcactctggctttgatggacggcggggtgccgattaaggcaccggtggccggg
gtggccatgggcctcatcaaagagggcgacaatttcgccgtgctcaccgacatccagggc
ctggaagacgccatgggcgatatggacttcaaggtggcgggaacggctgccgggatcaac
gcgctgcagatggacatcaaggtccacggcatcaccatcgacatcctgcggcaggcgctg
gagcaggcacggcgcggacgcctgttcatcctggacaagatgctcagcgtgattgaccgg
ccgcgtcccgagctttcgccctacgcgccccgcatgctcaccatggagatcgaccccgac
aagatccgggacgttatcggcccgggcggcaagaccatccgcaagatcatcgaggagacg
ggcgtacagatcgatatcgaggacgacggacgtgtctttattaccgcggtggatgagaac
gccgctcaccgggcgcaggagaagatcaaggccctcacgcgcgatgtggtagtgggtgag
atctacgtcggtcgcgttacccgcctgatgaacttcggggcctttgtcgagatccttcca
ggcaaggaagggctggtgcacatttcccagctggcgcgggagcgggtggcgcgggtggag
gatgtcgtccacgttggcgacgaagtggtggtcaaggtgaccgagattgaccgccagggc
aggataaacctctcgcgcaaggaagccctcaaggcggaagggaaaaaggacaaggcaggt
tcccgctga
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