Gelria sp. Kuro-4: kuro4_18680
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Entry
kuro4_18680 CDS
T07432
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
gek
Gelria sp. Kuro-4
Pathway
gek00900
Terpenoid backbone biosynthesis
gek01100
Metabolic pathways
gek01110
Biosynthesis of secondary metabolites
gek03010
Ribosome
Module
gek_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
gek00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
kuro4_18680
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
kuro4_18680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
gek03011
]
kuro4_18680
Enzymes [BR:
gek01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
kuro4_18680
Ribosome [BR:
gek03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
kuro4_18680
Bacteria
kuro4_18680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
CsrA
DUF6663
B12-binding
Fe-ADH_2
Motif
Other DBs
NCBI-ProteinID:
BCV25095
LinkDB
All DBs
Position
complement(1871795..1873912)
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AA seq
705 aa
AA seq
DB search
MQVIRANPSGFCPGVRAAINLARQALGREGRVYSWGPLVHNESVVAALARAGVRPIADLS
EAEVTGALIIRAHGVGPADIKAAVARGFRIYDGTCPRVKKVQRLAQELLAAGENVFLVGE
KEHPEVRGILAWAGGPVTVINSVKEVEELPAVPARVALVAQTTVTLAHVQAIAAALRQRG
AEVTLYDTLCFATTERQAAARELARQVDVMIVVGSHQSANTRRLVEVCQAEGVPTYLVNS
AGELRPEWLAGKDSVGVTAGASAPEEIIEEVCGRMSEEYRAEQKLAEGVEKVESQEAPAT
EATNQPDAQNTEQSPADETATTKTGESVEDLYAKSFLSLQEGQVVTGKVVRVDNDGVLVD
VAYKSEGVIPPAELSDKPYASPEEVVQLGQEVKVVVVKVDAEGNNLILSKRRADQEEAWE
ELKRHYENGEPVEGQVLEVVKGGLIVFVGLRAFMPASQVGLRYEADLSHYVGQTLKAKII
EIEPQRRRVILSHRTVLEAERAAKREALWAELEEGQVRHGRVTKLTDFGAFVDLGGAEGL
VHISELSWSRVRHPSEVVHEGDEVDVKVLRLDRERGRISLGLKQVKPDPWTEIRQSFPVG
TVHEGVVTNILNFGAFVKLADGIEGLVHISQLAPRHVGHPSEVVQIGQRVKVKVLDINED
KRRISLSIKQVPPELQPLAPAEEHPAPEAAAAEPSADADTDEKIE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggttattcgcgcaaaccccagcggattctgtcccggcgtacgtgccgccatcaac
ctggcgcgccaggcgctgggccgggagggccgggtttactcctggggcccgctggttcat
aacgaaagcgtggtggcggccctggcgcgcgcgggcgtgcgaccgattgccgatttaagc
gaggctgaggtgacgggggcgcttattatccgcgcgcacggggtcggtccagcggatata
aaagcggccgtcgccaggggttttcgcatctacgacggcacctgcccccgggtaaaaaag
gtgcagcggctggcgcaggaactgcttgcggccggtgaaaacgtctttttggtcggtgag
aaggaacacccagaagtcagaggtatactggcctgggccgggggacccgttacggtgatc
aattcggtcaaggaagtagaagagctgccggccgtacccgcacgcgtggctttggtcgcc
caaacaaccgtcaccctggcgcacgtccaggccatagcggccgccctgcggcagcgcggg
gcagaagtgacgctttatgataccctgtgtttcgcgaccacagaacgtcaagccgccgcc
cgcgagctcgcgcggcaggtagacgtgatgatagtggtaggtagtcaccaaagtgccaac
acccgccgtctggttgaggtgtgccaggcggaaggcgtgcccacgtacctggtcaacagc
gcgggcgagcttcgacctgagtggctggctggcaaagactcggtaggggtcaccgcgggt
gcctcggcaccggaggaaatcattgaggaggtctgcggcagaatgagcgaagagtaccga
gcggaacaaaagctggcggaaggagtagagaaggtagagagccaggaagcaccggcgacc
gaggccacgaaccagccagatgcgcaaaacaccgaacagtccccggcggacgaaacggca
accaccaagaccggtgaaagcgttgaagatctctacgccaagtcgttcctgtccctccag
gaaggccaggtagtcaccggtaaggtggtgcgcgtcgacaacgacggggtgctggtcgat
gtcgcctataaatcggaaggcgttattcctcctgccgaactgagtgataagccctatgct
tcgccggaagaagtggtccagctgggccaagaagtcaaagtcgtggtagttaaggtggat
gcagagggcaataatctcatcctttctaagcgccgcgccgaccaggaggaggcctgggag
gagctcaaacggcactacgaaaacggcgaacccgtcgaagggcaggttctggaagtagtc
aaaggcggtctcatcgtctttgttggactgcgtgccttcatgccagcttcgcaggtgggg
ctgcgctatgaggccgatttgtcgcactacgtcggtcaaaccctgaaggccaagatcatc
gaaatcgaaccgcagcggcggcgggttatcctctcgcaccgtacggtcttggaagccgag
cgggccgccaagcgagaagccctctgggccgaactcgaagaaggccaggtccgccacggc
cgggttaccaagcttacggatttcggagcctttgtcgatctgggcggagctgagggcttg
gtgcacatctccgagctgtcctggtcccgcgtccggcacccttcggaggtagttcatgaa
ggcgatgaggtggatgtaaaggtactccgcctggaccgggagcgcgggcggatctccctg
gggctcaagcaggtcaagcccgatccctggaccgaaatccggcagagcttccccgtgggg
acggttcacgagggcgtagtgaccaacatcctcaacttcggcgcctttgttaagctggcc
gacggtatcgaagggctggtgcacatttctcagctggcgccgcggcacgtcggacacccc
agcgaggtcgtgcaaatcggccagcgggtgaaggtgaaggtgcttgacatcaacgaggac
aagcgacggatcagcctgagcatcaagcaggtccccccggaacttcagccgctggctccg
gcggaagaacaccctgccccggaagcagctgcagcagagccttccgctgacgctgatacg
gatgaaaagatcgagtga
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