Gelria sp. Kuro-4: kuro4_19970
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Entry
kuro4_19970 CDS
T07432
Name
(GenBank) RNA polymerase sigma factor SigI
KO
K03093
RNA polymerase sigma-I factor
Organism
gek
Gelria sp. Kuro-4
Brite
KEGG Orthology (KO) [BR:
gek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gek03021
]
kuro4_19970
Transcription machinery [BR:
gek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
kuro4_19970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_AsnC-type
HTH_23
HTH_28
Xre-MbcA-ParS_M
CHASE7
Histone_HNS_N
HTH_11
DUF5997
DUF6362
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BCV25224
UniProt:
A0A9C7EJM2
LinkDB
All DBs
Position
complement(2004432..2005145)
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AA seq
237 aa
AA seq
DB search
MVKPGMREDLLALAKRGAPEARERLIQDYTPFILAIAAKVSGRYIRLGEDDEGSIGLLAF
NEAIDAYNDRKGNSFLKFSELVIRRRLLDFYRHEQRRQQEIPLTVLEGTETETQGQLLDR
LQENQAAASEEELERREEIIALKAHLAEYGVSFREVALACPRHRDARLRAIKVAKQIAAT
PAWLLALDERKTLPLSEIARKVGVSRKTLERQRKYILAVVLVLRGEFNHLKEYFREP
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaagcccggaatgagggaggaccttctcgcgttggcgaagagaggggctccggag
gcacgtgaaaggctcatccaggattacaccccctttatcctggccatagcagccaaggtc
tctggtcggtacattcgcttgggtgaagacgatgaaggcagcatcggtctccttgctttc
aacgaggccatcgatgcctataacgataggaaaggaaactcctttctcaagttttccgag
ctggttatccggcgccgcctgctggacttttatcgccatgaacagcggcgtcagcaggaa
atcccgctcacggttctggaagggacagaaaccgaaacgcagggacagcttctcgaccgt
ttgcaggaaaaccaggcggccgccagcgaagaagagttggagagaagggaggaaatcatt
gcgctcaaggcacacctggccgaatacggcgtgagctttcgcgaagtggcccttgcctgc
ccgcgccaccgcgacgcgcggctcagggccatcaaggtagcgaagcagattgccgccacc
ccggcctggctgctggccctggacgagcgcaaaaccctgcccctcagtgaaatagcccgg
aaggtgggcgtgagccgtaaaaccctggaacggcagcgaaagtatattctggccgtggtg
ttggtattgcgcggcgagttcaaccatctcaaagaatacttccgtgaaccgtag
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