Geobacillus sp. LC300: IB49_03470
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Entry
IB49_03470 CDS
T04018
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gel
Geobacillus sp. LC300
Brite
KEGG Orthology (KO) [BR:
gel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gel03016
]
IB49_03470
Enzymes [BR:
gel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
IB49_03470
Transfer RNA biogenesis [BR:
gel03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
IB49_03470
Prokaryotic type
IB49_03470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AKU25670
LinkDB
All DBs
Position
complement(648821..649744)
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AA seq
307 aa
AA seq
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MELLFLGTGAGVPAKERNVSSVALQLLDERGATWLFDCGEATQHQILHTAIRPRRIEHIF
ITHLHGDHLFGLPGLLGSRSFQSGETPLTVFGPKGIRAFVETALAVSGTKLRYELNIVEI
DEGVIFDDERFSVIAKRLDHGMPSYGFRVVEKDLPGPLLVDRLQALGVRPGPIYQEIKQG
KTVVLDDGTVIDGREFVGPPQKGRIVAVLGDTRFCEAAIELARDADVVVHEATFAAAEQR
LAHDYFHSTTTDAAEVARRAGAKRLILTHISSRYQGEAALQLVAEARKVFPNTDLAADFA
SFSIPRG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttggaactgttgtttttaggcacgggtgccggcgtgccggccaaagagcgcaacgtatcg
tccgtcgctttgcagctgcttgacgagcgcggggcgacatggctgtttgactgcggcgaa
gcgacgcagcatcaaattttgcataccgccattcgcccgcgccgcattgagcatattttt
attacgcacttgcatggcgaccatttgtttggattgcctggactgctaggcagccgttcg
tttcaaagcggcgagacgccgcttacggtcttcggcccaaaaggcattcgcgcgtttgtc
gaaacggcccttgccgtcagcgggacaaagctccgctatgaactgaacattgtggagatc
gatgagggcgtcatttttgacgatgaacggttttccgtcatcgccaaacggctcgatcac
ggcatgccgtcatacggtttccgcgtcgtggaaaaagatttgcccggcccgctcttggtc
gatcgattgcaagcactcggcgtccgccccggcccgatttatcaagaaattaagcaagga
aaaacggtcgtgctggatgacggcacggtcatcgacgggcgtgagtttgtcgggccgccg
caaaaagggcggatcgtcgcggtgctcggcgacacccgtttttgcgaagcggcgattgaa
ctcgcccgcgatgccgatgtcgtcgtccacgaggcgacgtttgccgcggcggaacagcgg
ctggcccatgactatttccattccacgaccacagatgcagccgaggtggcgaggcgggcc
ggagcgaagcggcttattttgacccatatcagctctcgctatcaaggcgaggcggcgctg
cagctcgtcgccgaggcgcggaaggtgtttccgaacaccgatcttgccgctgatttcgcc
tcgttttcgatcccgcgcggttaa
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