Geobacillus sp. LC300: IB49_07595
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Entry
IB49_07595 CDS
T04018
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
gel
Geobacillus sp. LC300
Pathway
gel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IB49_07595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gel03400
]
IB49_07595
DNA repair and recombination proteins [BR:
gel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IB49_07595
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IB49_07595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_19
AAA_22
TrwB_AAD_bind
AAA_7
AAA_30
AAA
UB2H
AAA_16
AAA_25
CsgA
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AKU26341
LinkDB
All DBs
Position
complement(1409651..1411627)
Genome browser
AA seq
658 aa
AA seq
DB search
MEGRFQLVSPYEPQGDQPQAIAKLVDGLQRGVKHQTLLGATGTGKTFTISNVIAQVNKPT
LVIAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEAYVPQTDTYIEKDAKINDEID
KLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQ
YDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRIEFFGDEIERIREVDALTGEVLGEREH
VAIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQV
LVDHGFRLPSALDNRPLTFEEFEQKIHQIIYVSATPGPYELEHSPGVVEQIIRPTGLLDP
TIDVRPTKGQIDDLIGEIHERAERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADTVTKSMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIRDVIRATY
AAEETEMYEAKPAAAMTKQEREELIRTLEAEMKEAAKALDFERAAQLRDIIFELKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtggagggccgttttcaattagtgtcgccgtacgaaccgcaaggcgatcagccgcaggcg
atcgccaagcttgtggacggcttgcagcggggtgtgaaacatcaaacgctccttggggcg
acggggacgggcaaaacgtttacgatctcgaacgtgatcgcccaagtcaacaaaccgacg
cttgtcatcgcccacaacaaaacgctcgccggtcaattgtacagcgagctgaaagagttt
ttcccgcacaacgccgtcgaatattttgtcagctattacgattattatcagccggaagcg
tacgtgccgcagacggatacgtacattgaaaaagacgcgaaaatcaacgatgaaatcgac
aaattgcggcactcggcaacgtcggcgttgtttgagcgccgggatgtcatcatcgtggcc
agcgtctcatgcatttacggcttagggtcgccggaagaataccgcgagcttgtcgtttca
ttgcgcgtggggatggaaatcgagcgcaacgcgttgctgcggcggctcgttgacatccaa
tacgaccgcaatgatatcgactttcggcgcggcacgttccgcgtccgcggcgatgtggtc
gaaattttccccgcgtcgcgcgatgaacattgcattcgcatcgagtttttcggcgatgaa
attgagcgcatccgcgaggtggacgcgctcaccggcgaagtgctcggcgagcgcgagcat
gtcgccattttcccggcgtcgcacttcgtgacgcgcgaggagaaaatgcggctcgccatt
caaaacatcgaacaagagcttgaggagcggctcgccgaactgcgcgcccaaggaaagctg
ttggaggcgcagcggctggagcaacggacgcgctatgatttggaaatgatgcgcgagatg
ggcttttgttccggcatcgaaaactactcgcgccatttggcgctgcggccgccgggatcg
acgccgtatacattgcttgactattttccggacgattttttgattatcgtcgatgagtca
cacgtcaccttgccgcagctgcgcggcatgtacaacggcgaccgggcgcgcaagcaagtg
ctcgtcgaccacggcttccgtctgccgtcggcgctcgacaaccgaccgctcacgtttgaa
gagttcgagcaaaaaatccatcaaattatttacgtctcggcgacgccagggccgtacgag
ctcgagcacagcccgggcgttgtcgaacaaatcattcgcccgaccgggcttcttgaccca
acgatcgacgtccgtccgacaaaaggacaaatcgacgatttgatcggcgaaattcatgag
cgcgccgagcggaatgaacggacgctcgtgacgacgctgacgaaaaaaatggcggaggat
ttgaccgattatttaaaagaagcggggatcaaggtggcgtatttgcattcggaaattaag
acgctcgagcgcattgaaatcatccgcgatttgcggctcggcaaatacgatgtactggtc
ggcatcaacttgctgcgggaaggattggacattccggaagtgtcgcttgtcgccattttg
gatgccgacaaagaagggtttttgcgttcggagcgctcgctcatccagacgatcggccgg
gcggcgcgcaacgcgaacggccatgtgatcatgtacgccgatacagtgacgaaatcgatg
gaaatcgctattcaagagacgaagcggcgccgggcgattcaagaagagtacaaccgaaag
cacggcatcgtgccgcgcacggtgaaaaaggagattcgcgacgtcatccgcgcgacgtat
gcggcggaagagacggagatgtacgaggcgaagccggcggcagcgatgacgaaacaagag
cgggaagagctgattcgaacgctcgaggcggagatgaaagaggcggccaaagcgctcgac
ttcgagcgggccgcccagctgcgcgatatcattttcgaattgaaagcggaaggatga
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integrated database retrieval system
