Geobacillus sp. LC300: IB49_16190
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Entry
IB49_16190 CDS
T04018
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gel
Geobacillus sp. LC300
Brite
KEGG Orthology (KO) [BR:
gel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IB49_16190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gel03019
]
IB49_16190
03009 Ribosome biogenesis [BR:
gel03009
]
IB49_16190
03036 Chromosome and associated proteins [BR:
gel03036
]
IB49_16190
Enzymes [BR:
gel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IB49_16190
Messenger RNA biogenesis [BR:
gel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IB49_16190
Ribosome biogenesis [BR:
gel03009
]
Eukaryotic type
90S particles
RNase
IB49_16190
Prokaryotic type
rRNA processing factors
IB49_16190
Chromosome and associated proteins [BR:
gel03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IB49_16190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Phage_P2_GpU
NTP_transf_4
Motif
Other DBs
NCBI-ProteinID:
AKU27674
LinkDB
All DBs
Position
3052463..3053203
Genome browser
AA seq
246 aa
AA seq
DB search
MSKQKDKERIHEKRRAKFQELQRKIGITFQNEKLLMQAFTHSSYVNEHRRRLHEDNERLE
FLGDAVLELTVSQYLFQKFPHMSEGQLTKLRAAIVCEPSLVKFANALSFGELVLLGKGEE
LTGGRTRPALLADVFEAFIGALYLDQGMEAVLHFLGQTIFPKIDEGAFSHVMDFKSQLQE
LVQRDGSGTLEYTILEEKGPAHNKEFVARVALNGQELGIGVGRSKKEAEQHAAQMALETL
RAAERP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaaaagacaaagaacgcatccacgaaaaaaggcgggcgaagtttcaagaa
ctgcaaaggaaaatcgggatcaccttccaaaatgaaaagctgttgatgcaagcgttcacc
cattcatcgtatgtgaatgagcatcggcggcggcttcacgaggataatgaacggctcgag
tttttgggcgacgccgtgctggagctgaccgtttcccaatatttgtttcaaaaattccca
catatgagcgaagggcagttgacaaagctgcgggcggccattgtctgcgagccgtcactt
gtgaaatttgccaacgccctgtcgtttggcgaactcgttttgcttggcaaaggcgaggag
ctgaccggcggacggacgcgcccggcgcttttggctgacgtgtttgaagcgtttatcggc
gccctttatttggatcaaggaatggaggcggtcctccattttttagggcaaacgatcttt
cccaaaatagatgaaggtgctttttctcatgtgatggattttaaaagccagctgcaggaa
ctcgtgcagcgcgacggcagcgggacgcttgaatacaccattttggaagaaaaaggaccg
gcccacaacaaagagttcgtcgcccgcgtggcgttaaacggccaagagctcggcatcggt
gtcggccgctccaaaaaggaagccgagcagcatgcggcacaaatggcgcttgagacgctg
cgggctgccgagcggccatag
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