Geobacillus sp. LC300: IB49_16780
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Entry
IB49_16780 CDS
T04018
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
gel
Geobacillus sp. LC300
Pathway
gel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IB49_16780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gel03400
]
IB49_16780
DNA repair and recombination proteins [BR:
gel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
IB49_16780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
14-3-3
AAA_28
AAA_27
AAA_29
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKU27780
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Position
3169125..3171833
Genome browser
AA seq
902 aa
AA seq
DB search
MPSYTPMIQQYLHIKAQYPDAFLFFRLGDFYELFFDDAIKAAQELEITLTSRDGGDERVP
MCGVPYHSAQGYIEQLIEKGYKVAICEQVEDPKTAKGVVRREVVQLITPGTLMEGKGLTE
KENHYLAALTPFADGTYGLAYADLSTGEIRLTLLSSWEETANELHAVGAREIIVATDSGE
EWVRELKERYGAAVSYEDDTSLCDEWNGVIGHVAQEKLRQAAARLLHYLVRTQKRRLDHL
QPAELYQVDHYMKMDRHSKLHLELVETVRSKGRKGSLLWLLDETVTAMGGRLLKQWLDRP
LIDRREIERRLDFVETLKTSYFERQELRDRLRGVYDIERLVGRVSYGNANARDLVQLKKS
LLQVPALRQTVGALPLAEADKLCERLDPCEELVDLLERSIQEQPPLSVKEGNLIKDGYDK
QLDRYRDASRNGKAWIAELEAKEREATGIKSLKVGYNRVFGYYIEVTKPNLPLVPEGRYE
RKQTLANAERFITPELKEKEALILEAEEKSIELEYELFVAIREQVKQYIPRLQTLAKAIA
ELDVLQSFATISDEYRYVRPQFSTERVLVIQGGRHPVVEKVLGAQMYVPNDCYMNREREM
LLITGPNMAGKSTYMRQVALTAIMAQIGCFVPAERAVLPIFDQVFTRIGAADDLSAGQST
FMVEMLEARRAIAHATQNSLILFDEIGRGTSTYDGMALAQAIIEYIHDHIGAKTLFSTHY
HELTALERSLPRLSNVHARAIEENGKVVFLHQIADGPADKSYGIHVAELAGLPASLIERA
RAILAELEKEAGKQEAAAGRMDDGALAEAGLAFQGNEALDVSSKVEHEKASRPSAGAARD
GVLAEAAFEQLSMFPDLAPASVEPPLSSKEKKALAALKEINLLEMTPLEALNKLYELQKL
LK
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgtacacaccgatgatccagcaatatttgcacattaaagcgcaatatccggac
gcgtttttatttttccggcttggcgatttttacgaactgttttttgacgacgccatcaag
gcggcgcaagagctggaaattacattaacaagccgcgacggcggcgatgaacgggtgccg
atgtgcggggtgccgtaccattcggcgcaaggatatattgaacagttaatcgaaaaggga
tataaagtcgccatttgcgaacaagtcgaagacccgaaaacggccaaaggcgtcgttcgc
cgtgaagtggtgcagctcatcaccccagggacgctcatggaaggcaaagggctcaccgag
aaggaaaaccactacttggcggcgctcacgccgtttgctgatggtacatacggattggct
tacgccgatttgtcgaccggcgagattcggctcacgcttctttcttcgtgggaggaaacg
gcaaacgaattgcacgccgttggagcgcgggagatcatcgttgccacagacagcggcgaa
gagtgggtgcgcgagctgaaagagcggtacggggcggcggtctcttatgaggacgacaca
tcgctatgcgacgaatggaacggcgtcatcggccatgtggcgcaagaaaagctgcggcag
gccgcagcccgtttgcttcattacctcgtccgcacgcaaaagcggcggctcgatcatttg
cagccggctgagttgtatcaagttgaccactatatgaaaatggaccgacattccaagctg
catttggaattggtcgaaacggtgcggtcaaaaggaaggaaaggctcgttgttatggctt
ttggatgaaacggtgacagcgatgggtgggcggctcttaaaacaatggctggaccggccg
ctcattgatcggcgcgaaatcgaacggcgcctcgattttgtggaaacgttgaaaacgagc
tattttgaacggcaggagctgcgcgacaggctgcgcggcgtttacgacattgagcgcctt
gtcggccgtgtctcctacggcaacgccaatgcccgcgatctcgtgcagctgaaaaagtcg
cttcttcaagtgccggcgctccgtcagacggtcggcgcgctgccgctcgctgaagcggac
aagctgtgcgagcgccttgacccgtgcgaagagctcgtcgatttgctcgagcgctcgatt
caagaacagccgccgctttccgtcaaagaagggaacctcatcaaagacgggtatgacaag
cagctcgaccgctaccgcgatgcgagccgcaacggcaaagcgtggatcgctgaacttgag
gcgaaggagcgggaagcgaccggcatcaaatcgctcaaagtcggctacaaccgagtgttt
ggctactatattgaagtgacaaagcccaatctcccccttgttccggaaggacgttacgag
cggaagcagacgctcgccaacgccgagcggtttatcaccccggagttgaaggaaaaagag
gcgctcattttggaggcggaagaaaaaagcatcgaactcgaatatgaactgtttgtcgcc
attcgcgagcaggtgaagcaatacatcccgcgcctgcagacgttggcgaaagccattgcc
gagcttgatgtgcttcaatcattcgcaacgatcagcgacgagtatcgctacgtgcgtccg
cagttttccacggagcgcgtcttggtgattcaaggcggccgccacccggttgtcgaaaaa
gtgctcggcgcgcaaatgtacgtgccgaatgactgctacatgaaccgcgagcgggaaatg
ctgctcatcactggaccgaacatggctggaaaaagcacgtacatgcggcaagtggcgctc
accgccatcatggcgcaaatcggctgcttcgtcccggccgagcgggcggtgctgccgatt
tttgatcaagtgttcacccgcatcggcgctgctgacgacctgtcggcaggacaaagcacg
tttatggtcgagatgctcgaagcgcgccgcgccatcgctcatgcgacgcaaaacagcctc
attttatttgatgaaatcgggcgcggcacatcgacatacgacggcatggcgctcgcccaa
gcgatcattgagtatattcatgaccatatcggtgcgaaaacactatttagcacccactac
catgaactcaccgccttggagcgttcgctcccgcggctttcgaacgtccatgcccgcgcc
atcgaggaaaacggcaaagtcgtctttttgcatcaaatcgccgacgggccggccgacaag
agctacggcattcacgtcgccgaactggccgggctgccggcttcgctcattgaacgcgcg
cgggccattttagcggaactggagaaagaggcgggaaaacaggaagccgccgcaggcagg
atggacgatggcgctttggcggaagcgggtttggcttttcaggggaacgaagcgttagac
gtcagcagcaaggttgagcacgagaaggcctcccgtccgtcagccggcgcggcgcgggat
ggcgttttggcggaagcggcgtttgagcagctgagcatgtttcctgaccttgccccggcg
tctgtggagccgccgctttcaagcaaagagaaaaaggcgctcgcggcgctgaaagagatc
aatttgctcgagatgacgccgcttgaggcgctcaacaaactgtatgaactgcaaaagctc
ctcaagtaa
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