Geobacillus sp. LC300: IB49_17680
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Entry
IB49_17680 CDS
T04018
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gel
Geobacillus sp. LC300
Pathway
gel03030
DNA replication
gel03430
Mismatch repair
gel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IB49_17680
03430 Mismatch repair
IB49_17680
03440 Homologous recombination
IB49_17680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gel03032
]
IB49_17680
03400 DNA repair and recombination proteins [BR:
gel03400
]
IB49_17680
Enzymes [BR:
gel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IB49_17680
DNA replication proteins [BR:
gel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IB49_17680
DNA repair and recombination proteins [BR:
gel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IB49_17680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AKU27905
LinkDB
All DBs
Position
3365998..3366726
Genome browser
AA seq
242 aa
AA seq
DB search
MHERHRFWQRALRLLSLGIPREASSALFGNDHSLQQEMWLRSLQKEKQHIINWHDRLTDI
PFVIIDMETTGFSPEQGDEILAMAAAKTVGGAVTDMYMTLVKPEKPIPQHISALTGIEAK
DVVFAPPLAEALRTFVPFIATGVLVGYHIGHDLAFLRHALWRHYRQKWSGRFLDLQPMMT
LIGHSCPTFDDALACYGIRCPRRHTADGDVEAMTKLWAILLKELHGRGIDTLHDLYAALS
RH
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcggcaccgtttttggcagcgggcgctccgcttgttgtcgcttggcatccct
cgtgaagcatcatccgccctattcggcaacgatcattcgctgcagcaggaaatgtggctg
cgctcgctgcaaaaggaaaaacagcacatcatcaattggcatgaccgtttgactgacatc
ccgtttgtcatcatcgatatggaaacgaccggcttttccccggagcaaggcgatgaaatt
ttggccatggcggcagcgaaaacggtcggaggagccgtgaccgatatgtacatgacgctc
gtcaagccggaaaagccgatcccgcaacacatctccgccttgaccggcattgaggcgaag
gatgtggtgttcgctccgccgcttgccgaggcgctgcgcacgtttgtgccgtttattgcc
acaggcgttttagtcggctatcatatcggccatgatttggcgtttttgcgccatgccctt
tggcgccattatcggcaaaaatggagcggacgatttcttgacttgcagccgatgatgacg
ctgatcggccattcgtgcccgacgtttgacgatgcgttagcttgttacggcatccgttgc
ccgcgccgccatacggccgacggcgatgtcgaagcgatgacgaagctatgggcgattttg
cttaaggagcttcacgggcgcggcatcgatacgttgcacgatttgtacgcggcgctcagc
cgccactga
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integrated database retrieval system
