Geobacter sp. M21: GM21_0004
Help
Entry
GM21_0004 CDS
T00933
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gem
Geobacter sp. M21
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gem03032
]
GM21_0004
03400 DNA repair and recombination proteins [BR:
gem03400
]
GM21_0004
Enzymes [BR:
gem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GM21_0004
DNA replication proteins [BR:
gem03032
]
Prokaryotic type
DNA Topoisomerases
GM21_0004
DNA repair and recombination proteins [BR:
gem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GM21_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACT16091
UniProt:
C6E7Q8
LinkDB
All DBs
Position
4052..6442
Genome browser
AA seq
796 aa
AA seq
DB search
MNSEEQGDYGADKIQILEGLEAVRKRPAMYIGSTAAQGLHHLVYELVDNAIDEALAGYCD
AVQVIIHLDGSVTVEDNGRGIPTDMHPTEGRSAAEVVLTVLHAGGKFDNSSYKVSGGLHG
VGSSVVNALSTRLDLEIRRNGHVYTQTYRKGVPQAPLEITGETKRRGTKITFFPDGEIFE
TTEFSFDVLSKRLRELAFLNAGVRIKIHDERFDKDHDFFYEGGIRSFVEYLNKNKNLVNP
EPIYIRGEKSGVDIEIAMQYNDSYDEKVFSFANNINTHEGGTHLIGFKAALTRTMNTYAN
TNNLLKNVKVAISGEDLREGLTAVISVKISQPQFEGQTKTKLGNSEVKGYVETLMNEKLA
TYLEENPAMARKILEKSIDAARAREAARKARELTRRKGALEVGTLPGKLADCQEKDPALC
ELFLVEGDSAGGSAKQGRDRKYQAILPLKGKILNVEKARFDKMLASQEIRTLISALGTSI
GKEDFDIAKLRYHRIIVMTDADVDGSHILTLLLTFFFRQMLELIERGYLYIAQPPLYKIK
RGRKEQYLKNEAALQAYLLEEGTEEMTLKLGVGSDERVYRGKQIIPILTQLIDYNELFDK
VVKKGINDELLSVFLKTGIKPGLEEMADLIALLPKMKEAFPEVTTEEFGDSIIFAFGNLR
VKIDHQIFTVLESYEYGMLLESHKRMRSVMGTGTGVVLGAEDKVVLETESQEDILSFFME
SAKKGLYIQRYKGLGEMNPEQLWETTMHQENRVLLQVKIEDAVAAEEIFTVLMGDQVEPR
RDFIEQNALNVSNLDI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaactcagaagaacagggcgattacggggcagataagatccagatactggaaggactg
gaagcggtacgaaaacgtccggccatgtacatcggttccacagccgctcagggtttgcat
cacctggtgtacgaactggtggacaacgcgatcgacgaggcgctggccggctattgcgac
gcggtccaggtcatcatccatttggacggctcggtgacggtcgaggacaacggccgcggc
ataccgaccgacatgcacccgaccgagggaaggtcggctgcggaggtcgtccttaccgtc
ttgcacgccggcggcaagttcgacaactcctcctacaaggtctcgggcggcctgcacggc
gtcggcagttccgtcgtcaacgcgctttccacccggctcgacctggagatccgcagaaac
gggcacgtctacacccagacctacagaaaaggtgtgccgcaggcgccgctggagataacc
ggcgagaccaagaggcgcggcaccaagatcaccttctttccggacggcgaaatattcgag
accactgagttttccttcgacgtcctctccaagaggctcagggagctcgccttcctgaac
gcaggagtacggataaagatccacgacgaacggttcgataaggatcacgacttcttctac
gagggggggatccggagcttcgtcgagtacctcaacaagaacaagaacctggtaaaccct
gagccgatctacatcaggggggagaagagcggcgtcgatatcgagatcgccatgcagtac
aacgactcctacgacgaaaaggttttctccttcgccaacaacatcaacacccacgaaggc
ggaacgcacctgatcggcttcaaggccgcgctcacgcgcaccatgaacacctacgccaac
accaacaacctcttgaagaacgtgaaggtggcgatttccggcgaggacctgagggagggg
cttaccgccgtcatctccgtcaagatctcccagccgcagttcgaggggcagaccaagacc
aagctggggaactcggaggtgaagggttacgtcgagaccctcatgaacgagaagctcgcc
acctatctggaagaaaaccccgccatggccaggaagatcctggagaagtcgatcgatgcg
gctcgtgcccgcgaggctgcaaggaaggcgcgcgaactgacccgccgcaaaggcgcgctc
gaggtggggacgctgccggggaaactcgcggactgccaggagaaggacccggcgctttgc
gaactgttcctggtcgagggcgactccgctggcggctccgccaagcaggggcgcgacagg
aagtaccaggcgatcctccccttgaaggggaagatcctcaacgtcgagaaggcgcgcttc
gacaagatgctcgcctcccaggagatcaggaccctgatctcggcccttggcaccagcatc
ggcaaggaagacttcgacatagcgaagctccgttaccaccgcatcatcgtcatgaccgat
gcggacgtcgacggctcgcacatcctcaccctgcttctgaccttcttcttccgccagatg
ctggagctcatcgagcgcggctacctctacatcgcgcagccccctttgtacaagatcaag
cgcggcaggaaagagcagtacctcaagaacgaggcggccctgcaggcctacctcctcgag
gaagggaccgaggaaatgacgctgaaactaggcgttgggagcgacgagcgggtctaccgc
ggcaagcagatcatccccatactgacccagctgatcgactacaacgaactgttcgacaag
gtggtcaagaaggggatcaacgacgaactcctgagcgtgttcctgaagaccggcatcaaa
ccgggcctggaagagatggccgacctgatcgccctcttgccgaagatgaaggaggccttc
cccgaggtaaccaccgaggagttcggcgacagcatcatcttcgctttcggcaacctgagg
gtgaagatagaccaccagatcttcacggtgctcgagtcctacgagtacggcatgctgctg
gagagccacaagcggatgcgttcggtcatggggacaggcacaggcgtcgtcctgggcgcc
gaagacaaggtggtgctcgagaccgaaagccaggaggatatcctctccttcttcatggag
agcgccaagaaggggctctacatccagcgctacaaaggtctcggcgagatgaaccccgag
cagctctgggagaccaccatgcaccaggagaacagggtgcttctgcaggtgaagatcgag
gacgcggtggcggccgaggagatcttcaccgtgctcatgggggaccaggtcgagccgcgg
cgcgatttcatcgagcagaacgcgctgaacgtctccaacctggatatctaa
DBGET
integrated database retrieval system
