Geobacter sp. M21: GM21_0229
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Entry
GM21_0229 CDS
T00933
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gem
Geobacter sp. M21
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gem03016
]
GM21_0229
Enzymes [BR:
gem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GM21_0229
Transfer RNA biogenesis [BR:
gem03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GM21_0229
Prokaryotic type
GM21_0229
SSDB
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Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ACT16314
LinkDB
All DBs
Position
complement(272696..273751)
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AA seq
351 aa
AA seq
DB search
MTPHFLPALVNPPFGDPGLYVDFLFARRALLFDLGDLAPLPTRKLLRVSDICISHTHIDH
FIGFDLMLRIMLGRDKKVRLYGPPGILRQVEHRLASYSWNLIQSYPTEFVLTVTELHPDG
SAQRASFSSRRIFERENQQELMLPDGVVLDEENLRIRATFLEHSIPCLAYAFEEKLHVNF
MKNRLAELGLPVGPWLSEVKRSVLRGEPDDRLIYPAAAGEERPPSGWTIAELKEKVLQVV
PGEKIAYVTDTAFTNENRRRIVELARDADYLFIEAVFLHVDSERARDRAHLTARQAGELA
REAGVVRVFPFHFSPRHLGAEGELRREVNQAFAAPAAAPLPASPLRVEESG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcacttcctgccggccctggtgaaccctcccttcggcgaccccggcctctac
gtcgatttcctcttcgcgcgccgggcgctcctcttcgacctgggggacctggcgccgctt
cccacgcgcaagctcttgcgagtcagcgacatctgcatctcgcatacccatatcgaccac
ttcatcggcttcgaccttatgctgcgcatcatgctgggtcgggacaagaaagtgagactg
tacggtccccccggcatcctgcggcaggtggaacaccgcctcgcttcctacagctggaac
ctgattcaaagctaccccaccgagttcgtcctcaccgtcaccgagctccatcccgacggc
agcgcgcaaagggcaagcttcagctcccggcgcatcttcgaaagggaaaaccagcaggaa
ctcatgctccccgacggcgtcgtgctggacgaggagaacctgcgcatccgcgccaccttc
ctggaacacagcatcccttgcctcgcctatgccttcgaggaaaagctgcacgtaaacttc
atgaaaaaccgccttgccgagctggggctgccggtcggaccctggctttcggaagtaaag
cgctcggtgctccggggggagccggacgataggctaatctatccagcggcggcgggcgag
gagcgtcccccttccggctggaccatagcagagctgaaagaaaaggtgctgcaggtggtg
ccgggggaaaagatcgcctatgtcaccgacaccgccttcaccaatgagaaccgccggcgc
atcgtggagctggcgcgggacgccgactacctcttcatcgaggcggtctttttgcacgtc
gactccgagcgggcgcgcgaccgggcgcacctcaccgcccggcaggccggcgagctggcc
agggaggcaggcgtcgtgcgggtcttccccttccacttctcccccaggcatttgggggcg
gaaggcgagcttcgacgcgaggtcaatcaggccttcgcggcgcccgctgccgcccccctc
ccagcctctcccctccgggtggaggagagcggatag
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