Geobacter sp. M21: GM21_0339
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Entry
GM21_0339 CDS
T00933
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gem
Geobacter sp. M21
Pathway
gem00300
Lysine biosynthesis
gem00470
D-Amino acid metabolism
gem01100
Metabolic pathways
gem01110
Biosynthesis of secondary metabolites
gem01120
Microbial metabolism in diverse environments
gem01230
Biosynthesis of amino acids
Module
gem_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GM21_0339
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GM21_0339
Enzymes [BR:
gem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GM21_0339
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
RGM_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACT16420
UniProt:
C6DYE5
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Position
complement(417902..418738)
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AA seq
278 aa
AA seq
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MKFTKMQGAGNDYVYVNCFEEAVHDPAAVAIKVSNRNFGIGSDGLILIMPSEVADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVSKNEITAETGAGILTLQLFTGAGGKVEKVRVN
MGPPRLTRKEIPMLGEPEERVVNVPLNVLHSSFNITCASMGNPHCVIFVDDVDSFQVEKY
GPLIENHELFPRRTNVEFVQIVSRTEVRQRTWERGAGETLACGTGSSAVTAACVLNGLTE
KRILNHLTGGDLEMEWGEDGNIYMTGPAVEVFSGEIGL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacaaagatgcagggtgcgggcaacgactacgtgtatgtcaactgtttcgaa
gaggcggtgcacgaccctgccgcggtggcgataaaggtatccaaccgcaacttcggcatc
ggatcggacgggctgatcctgatcatgccgagcgaagtggctgacgtaaggatgcggatg
ttcaactcggacggatcggaaagcgagatgtgcggcaacggcatccgctgcgtggcgaag
tacgcctacgaccacggcatagtgtcgaaaaacgagatcacggccgaaaccggcgccggg
atcctgaccctgcagcttttcaccggcgccggcggcaaggtggaaaaggtgcgggtcaac
atggggccgccgaggctgaccaggaaagagatccccatgctgggagagcctgaggagcgg
gtggtcaacgtgccgctcaacgtgctccactccagcttcaacatcacctgcgcctccatg
ggaaacccccattgcgtcatcttcgtggacgacgtggacagcttccaggtcgagaagtac
ggcccgctgatcgagaatcacgagttgttcccgcgccgtaccaacgtggaattcgtccag
atcgtctcccgcaccgaagtgcgccagcgcacctgggaacgcggcgccggcgaaacgctt
gcctgcggcaccggctccagcgccgtcaccgccgcctgcgtcctgaacgggctgaccgag
aagcgcatcctgaaccacttaaccggcggcgacctggagatggagtggggggaggacggc
aacatctacatgaccggcccggcagtcgaggtcttcagcggcgagataggcttataa
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