KEGG   Geobacter sp. M21: GM21_0339
Entry
GM21_0339         CDS       T00933                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
gem  Geobacter sp. M21
Pathway
gem00300  Lysine biosynthesis
gem00470  D-Amino acid metabolism
gem01100  Metabolic pathways
gem01110  Biosynthesis of secondary metabolites
gem01120  Microbial metabolism in diverse environments
gem01230  Biosynthesis of amino acids
Module
gem_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:gem00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GM21_0339
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GM21_0339
Enzymes [BR:gem01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     GM21_0339
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase RGM_N AAA_7
Other DBs
NCBI-ProteinID: ACT16420
UniProt: C6DYE5
LinkDB
Position
complement(417902..418738)
AA seq 278 aa
MKFTKMQGAGNDYVYVNCFEEAVHDPAAVAIKVSNRNFGIGSDGLILIMPSEVADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVSKNEITAETGAGILTLQLFTGAGGKVEKVRVN
MGPPRLTRKEIPMLGEPEERVVNVPLNVLHSSFNITCASMGNPHCVIFVDDVDSFQVEKY
GPLIENHELFPRRTNVEFVQIVSRTEVRQRTWERGAGETLACGTGSSAVTAACVLNGLTE
KRILNHLTGGDLEMEWGEDGNIYMTGPAVEVFSGEIGL
NT seq 837 nt   +upstreamnt  +downstreamnt
atgaaattcacaaagatgcagggtgcgggcaacgactacgtgtatgtcaactgtttcgaa
gaggcggtgcacgaccctgccgcggtggcgataaaggtatccaaccgcaacttcggcatc
ggatcggacgggctgatcctgatcatgccgagcgaagtggctgacgtaaggatgcggatg
ttcaactcggacggatcggaaagcgagatgtgcggcaacggcatccgctgcgtggcgaag
tacgcctacgaccacggcatagtgtcgaaaaacgagatcacggccgaaaccggcgccggg
atcctgaccctgcagcttttcaccggcgccggcggcaaggtggaaaaggtgcgggtcaac
atggggccgccgaggctgaccaggaaagagatccccatgctgggagagcctgaggagcgg
gtggtcaacgtgccgctcaacgtgctccactccagcttcaacatcacctgcgcctccatg
ggaaacccccattgcgtcatcttcgtggacgacgtggacagcttccaggtcgagaagtac
ggcccgctgatcgagaatcacgagttgttcccgcgccgtaccaacgtggaattcgtccag
atcgtctcccgcaccgaagtgcgccagcgcacctgggaacgcggcgccggcgaaacgctt
gcctgcggcaccggctccagcgccgtcaccgccgcctgcgtcctgaacgggctgaccgag
aagcgcatcctgaaccacttaaccggcggcgacctggagatggagtggggggaggacggc
aacatctacatgaccggcccggcagtcgaggtcttcagcggcgagataggcttataa

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