Geobacter sp. M21: GM21_0346
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Entry
GM21_0346 CDS
T00933
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gem
Geobacter sp. M21
Pathway
gem03030
DNA replication
gem03410
Base excision repair
gem03420
Nucleotide excision repair
gem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM21_0346
03410 Base excision repair
GM21_0346
03420 Nucleotide excision repair
GM21_0346
03440 Homologous recombination
GM21_0346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gem03032
]
GM21_0346
03400 DNA repair and recombination proteins [BR:
gem03400
]
GM21_0346
Enzymes [BR:
gem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM21_0346
DNA replication proteins [BR:
gem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GM21_0346
DNA repair and recombination proteins [BR:
gem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GM21_0346
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM21_0346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
KH_DEAH11
Motif
Other DBs
NCBI-ProteinID:
ACT16427
UniProt:
C6DYS6
LinkDB
All DBs
Position
421621..424299
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AA seq
892 aa
AA seq
DB search
MTTETETLYLLDGSSYIYRAYFAIRHLSSPNGFPTNALYGFTQMLLKVMKDRAPAHVAVI
FDAGKITFRNELFPAYKATRSAMPEDLAQQIEPIKQMVRAFNIPALELPGFEADDIIGTI
ARKCEAQGMACVVVTGDKDLMQIVSDRVTLLDTMKEKSFGIAEVYEKFGVAPERVVDVLA
LWGDASDNIPGVPGIGEVTAKKLLQEFGSLDELLARAGEVKGKNGERLVEFADQARLCRT
LATIDCNVPIEYSIDDFAVTPPDNRRLAALFREYGFATLLKDLTSSPTLSCDRYSLVLTE
EELRRVAAELEAAPAFAIDLETTSLNPREARVVGYAASCRPHEAWYIPVGHRYLGAPEQL
PESLVLEILGPLLKDPARRKIGQNLKYDYQVLRIAGFELEGIWCDTMLAAYLVNPARNSQ
GLDALALEYLDHRMISYAEVARSGKCELNFSEVDLDRAGPYSCEDADATYLLHEILLPKV
REQGMEELLFDLEMPLMRILADMELHGVKLDVDLMKELSTGFGKQLIELEAQIHEHCGGP
FNINSPKQLGEMLFERMGLAVGKKTKGKTGWSTNVEELERLAEEHEVARLLLQYRSISKL
KSTYTDALPKLVAPATGRVHTSYNQAVTSTGRLSSSDPNLQNIPIRGEEGRGIRRAFIAE
PGSLMLSADYSQIELRVLAHLSGDRVLCEAFAAGEDIHRRTASEVFGMFPELVTSEMRRQ
AKVINFGVIYGQGAFSLAKELGVTPKQAKAFIDSYFERHSGARSFLDSCIREAEVCGFVT
TIMGRRLCIPEIASKNGNVRAFAQRNAVNYPIQGSAADIIKAAMLRVNRRMQEERVASRL
IMQVHDELIFEVPEGERDLMEELVRTEMEAALPLSVPLKVDLNFGLNWSEAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtgacgactgaaacagagacgctgtaccttctggacggctcttcctacatataccgcgcc
tatttcgccatcaggcacctctcttcccccaacggttttcccaccaacgcgctctacggt
ttcacacaaatgctcctcaaggtgatgaaggaccgggcccccgcccacgtcgccgtcatc
ttcgacgccggcaagatcaccttcagaaacgagctcttccccgcctacaaggcgacccgc
agcgccatgccggaggacctggcccagcagatcgagccgatcaagcagatggtgcgcgcc
ttcaacatcccggcgctggagctgccggggttcgaggccgacgacatcatcgggaccatc
gccaggaaatgcgaggcccaagggatggcctgcgtcgttgtgaccggcgacaaggacctg
atgcagatcgtctccgaccgggtcaccctgctcgacaccatgaaggagaagagcttcggc
atcgcggaggtgtacgagaagttcggggtggcgccggaacgggtggtggacgtgctggcg
ctttggggggacgcatcggacaacatccccggcgtccccggcatcggggaggtgacggcc
aagaagctgttgcaggaattcggctctttggacgagcttttggcccgtgccggagaggtg
aaggggaaaaacggcgagaggctcgtggagttcgccgaccaggcgcgtctttgccgcacc
cttgccaccatcgactgcaacgtccccatcgagtacagcatagacgatttcgcggtaaca
ccgccggacaaccgccgtctcgcggccctgttccgggagtacggtttcgccaccctcttg
aaggacctgaccagctctcccaccctctcctgcgaccgttacagcctggttttgacggag
gaggaactgcgccgtgtggcagccgagctggaagcggcccccgctttcgccatcgacctg
gagaccacgagcctcaacccaagggaggcgcgcgtcgtgggatacgcggcgagctgccgc
ccgcacgaggcctggtacatcccggtcgggcaccgctatctcggggcgccggagcagctt
cccgaatccctggtccttgagatcctagggccgcttttgaaggacccggcgcgccgcaag
atcggccagaacctgaaatacgactaccaggtgctccggatagcggggttcgaactggag
gggatctggtgcgacaccatgctggccgcctacctggtcaacccggcgcgcaacagccag
gggctcgacgccctggccttggagtacctggaccaccgcatgatctcctacgcggaggtg
gcgcggagcggcaaatgtgagttgaacttctccgaggtcgatttggaccgcgccggcccc
tactcctgcgaggacgccgacgccacgtatctcttgcacgagatactgcttcccaaggtg
cgggagcaggggatggaagagctcctgttcgatctggagatgccgctgatgcggattctg
gccgacatggagctgcacggggtgaagctggacgtggacctcatgaaggagctttccacc
gggttcggcaagcagctgatcgagctggaggcgcagatccacgagcattgcggcggcccc
ttcaacatcaattccccgaaacagttgggggagatgctctttgagcggatggggcttgca
gtcgggaagaagaccaaggggaagaccggctggtccacaaatgtggaggagctggagcgt
ctggccgaggagcacgaggtggcgcggctccttttgcagtacagaagcatctcgaagctg
aagtcgacctacaccgacgcgcttcccaagctggtcgctccagccaccggccgggtgcac
acctcatacaaccaggcggtgaccagcaccggcaggctttcctccagcgaccccaacctc
cagaacatacccatccggggcgaagaggggcgcggcatcaggcgcgccttcatcgccgag
ccggggagcctcatgctctccgccgactactcccagatcgagctcagggtgctggcgcac
ctctccggcgaccgcgtcctctgcgaggccttcgccgccggcgaggacatccatcgccgc
accgcctccgaggtgttcggcatgtttccggagctggtgacctccgagatgaggcgccag
gccaaggtgatcaacttcggcgtcatctacgggcagggggccttcagcctcgccaaggag
ctgggtgtgaccccgaagcaggcgaaggccttcatcgacagctacttcgagcgccacagc
ggcgcgcggagctttctggacagttgcatccgcgaggcggaggtatgcggcttcgtcacc
accatcatggggagaaggctctgcattccggagatcgccagcaaaaacggcaacgtgcgc
gccttcgcccagagaaacgcggtgaactacccgatccagggttcggcggccgacatcatc
aaggccgccatgctgagggtgaaccgccgcatgcaggaagagcgggtggcgagccggctc
atcatgcaggtccacgacgaactgattttcgaggttccggagggggagcgcgatctcatg
gaggagctggtgcggaccgagatggaggccgccctgccgctgtcggtgcctctcaaggtg
gacctcaatttcgggcttaattggagcgaggcgcactag
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