KEGG   Geobacter sp. M21: GM21_0430
Entry
GM21_0430         CDS       T00933                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gem  Geobacter sp. M21
Brite
KEGG Orthology (KO) [BR:gem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gem02048]
    GM21_0430
Enzymes [BR:gem01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GM21_0430
Prokaryotic defense system [BR:gem02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GM21_0430
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD RecX_HTH1 baeRF_family3
Other DBs
NCBI-ProteinID: ACT16510
UniProt: C6DZ09
LinkDB
Position
507673..510765
AA seq 1030 aa
MPEQPRSERKTQNRVVSLFTDGSRQDGLGYRYLGDWHERADNGPIEPALLRQNLKARGYS
DAHISAALQKLERAAEVTGTTLYQANLRTYQLLRYGVPVQVAAGRPHETVHLVDWEHTDK
NDFALAEEVTLRGGYERRPDLVIYMNGITVGVIELKRSSVDVADGVRQLLTNQEEIFNEW
FFSTIQFVFAGSDSQGLRYGTVGTPEKFFVEWKAPGHDGESSLPGALLDRPLAEMCEKGR
LLDLIRNFIIFDAGQKKVPRPHQFAAVKAAQERIRTREGGVIWHTQGSGKSILMVLLAKW
LLEHDPEGRILIVTDRDELDKQIEGVMKNAGVVGAESPSPRITSRAQFSDKLAATSPRLL
CALIHKFDLDPKSEPPPIRGRFYVFVDECHRTQGGDMNKQMKRWLENAIFIGFTGTPLLR
RDKQTTREIFGTYIHTYKFHQAVEDKVVLDLKYEARTVPQRLTSRKAIDDWFDQKTRGLN
NYQRAVLRKRWATMEELMSSGERKQRIIADIIHDFGVQQRLNNDRGTAMLVADSIYDACH
YFRLLQNTSFGAYCGIVTSYEPNHNAISREPKDSDERYKFDTYTRHVLRAGQTTKQYEDE
TKRRFIEEPANCKLLIVVSKLLTGFDAPSCTYIYLDSKMQDHTLFQAICRTNRLDGDDKS
FGHIVDYKELFEKVQNSIAVYSSDELDIENGDGDNNVRLKDWLREGKAQLDAAREALRYL
CEPVMQPREMEQYVEYFCGYGNGLEALAATEPLRISYYKSVVTFLRAYADVAQNLAEAGY
SSVEIAALEQETKFHCDTRAAIKNHSGEELDIKPYEADMRHLINTYIQADPATDLGNLSS
LSLTQLIIETGIHDAIARKLNQQGKLSRNAIAEGIINNVRKTIIREKLTDPRFYEEMSKL
LEDLIRQKRNGTKSYEEFLKKAEELVRRLARKHPEAGIPVVLYGKPEAIALFNNLRGIPA
TSFRYPTDDEERAQLALDLDRVVCAEAPANWIGDDAREKQVLNALFPKLARDREATLAIF
EIVKNQPGYK
NT seq 3093 nt   +upstreamnt  +downstreamnt
ttgcctgaacagccccgatcggaacgcaagacgcagaaccgcgttgtctcccttttcacc
gatgggagccgccaagatggcctcggctaccgctacctcggggactggcatgaacgcgcg
gacaacggtccgatcgaaccggcactattgcggcaaaacctcaaggctagaggctattcc
gacgctcacatctccgcagccctgcaaaagctcgaaagagcggcggaagtcacgggcacc
acgctctaccaagcaaacctccgcacttatcagttgctgcgttacggcgtgccggtccag
gtcgcagcagggcgcccgcatgagacggtgcacctcgtcgactgggagcacacggataaa
aacgacttcgcactggccgaggaagtgaccttgcgcggcggatacgagcgcaggcccgac
ctggtcatctacatgaatggcattacggtgggggtgatcgaacttaagcgcagttccgtg
gatgtggccgacggtgtgcgccagctcctaacaaaccaggaagagatcttcaacgagtgg
ttcttcagtaccatccagttcgtctttgcaggaagcgactcgcagggattgcgctacggc
actgtcggcacgccggaaaagttcttcgtggagtggaaggcacctggacacgatggagaa
tcttcccttcccggcgcgctcctggaccggcctcttgcagagatgtgcgagaaggggcgc
ctgctcgatctgatccgtaacttcatcatcttcgacgccggacagaagaaggtgccgcga
ccgcaccagttcgcggcggtcaaggcggcccaggagcggatcaggacgcgcgagggaggc
gtcatctggcacacccaagggagcggcaaaagtatcctgatggtgctgctggccaagtgg
cttctggagcacgaccccgaggggcgaatcctgatcgtcacggaccgcgacgagttggat
aaacagatcgaaggggtgatgaaaaacgccggagtcgtgggggcggaatccccttcgccg
cgcatcacctcccgcgcacagttctccgacaagcttgccgccacctcgccccggctctta
tgcgcactgattcacaagttcgacttggaccccaaaagcgagcccccgcccatacgcggg
cgcttctatgtgttcgtggacgaatgtcaccgcacccagggcggcgacatgaacaagcag
atgaaacgctggctggaaaacgccatcttcatcggcttcaccggaactcctcttctgcgc
cgcgacaagcaaaccacccgcgagatcttcggcacctacatccacacctacaagttccac
caagcggtggaagacaaggtggtcctggacctgaaatacgaggcccgcaccgtccctcag
cgtctcacctccagaaaggcgatcgatgattggttcgatcagaagacccgggggctgaac
aactaccagcgcgcagtcctccgcaagaggtgggcgacgatggaggagctgatgagctcc
ggcgagcgcaagcagcgcatcatcgccgacatcatccatgacttcggggtgcagcaacgc
ctgaacaatgaccggggcacagccatgctcgtggccgactccatctacgacgcctgccat
tacttccgcctgctccagaacacttcttttggtgcctactgcggcatcgtcacctcctac
gaaccaaaccacaacgccatctcccgtgaaccgaaggatagcgacgagcgttacaagttc
gacacctacacgcgccatgtactgagagcgggccagactacgaagcagtacgaggatgaa
acgaagcgtcgcttcatcgaggagccggccaactgcaaactcctcatcgtggtgagcaag
cttctcaccggcttcgacgcaccttcctgcacttacatctatctcgacagcaagatgcag
gaccacaccctttttcaggccatctgcaggaccaaccggctcgacggggacgacaagtcc
ttcggccatatcgtcgattacaaggagctgttcgagaaggtgcagaactccatcgcggtc
tacagctccgatgagctggacatcgaaaacggggacggcgacaacaacgtgaggctcaag
gactggctgagagagggtaaggcgcagctcgacgcagcccgcgaggcgctccgctacctc
tgcgaaccggtgatgcagccgcgcgagatggagcagtatgtggagtacttctgcgggtac
ggcaacggactcgaagccctcgctgcaacagagccgctgcgcatctcgtactacaagtcc
gtcgtcaccttcctgcgcgcctatgccgatgtagcgcaaaaccttgccgaggcgggttat
tccagtgtcgagatcgccgctttggagcaggagacaaaattccattgcgacacccgggcg
gcgataaagaaccattcgggggaagaactggacatcaagccctacgaggcggacatgcgc
cacctcatcaacacctacatacaggccgaccccgccaccgacctgggcaacctgagttcg
ctctcccttacccagctcatcatagagaccggcatccacgacgccatagcccggaagctc
aaccagcaggggaagctctcccgtaacgccatcgcggaggggatcatcaacaacgtccgc
aagacgatcatccgagagaagcttaccgaccccagattctacgaggagatgtctaaactg
ctcgaggacttgatccggcagaagcggaacggcacgaagtcctacgaggaattcctgaaa
aaggcagaggagctggtcaggcgcttagcgcggaagcatccagaggctggcatccctgta
gttctgtacggcaaaccggaagccatcgcgctattcaacaatctccgcggtatcccggcg
accagctttcgctatcccacggatgatgaggagagggcgcagctagccctggatctggac
cgggtggtatgcgctgaggctccggccaactggataggggacgatgcacgggaaaagcag
gtcctgaacgccctgttccccaagctcgcgcgcgaccgcgaagccacgctggcaatcttt
gaaatcgtcaagaaccaaccaggctacaaatga

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