Geobacter sp. M21: GM21_0489
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Entry
GM21_0489 CDS
T00933
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
gem
Geobacter sp. M21
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gem01011
]
GM21_0489
Enzymes [BR:
gem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GM21_0489
Peptidoglycan biosynthesis and degradation proteins [BR:
gem01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GM21_0489
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
MerR
SLT_2
Motif
Other DBs
NCBI-ProteinID:
ACT16569
UniProt:
C6DZI7
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All DBs
Position
602459..603922
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AA seq
487 aa
AA seq
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MIKTTLIILSLLFSTTAFAASAGTAAEQREQRDLARAMQVAYNSSDVALSKGLGLTPSDF
SDDEDFSDDSQDYDLKLPEMELPDSDIPLTFNTKVEYFVRYFQGPARPVFAKWLSRSERY
IPMMKTVLKKEGLPEDLVYLAMIESGFMTHAVSVASAVGPWQFMPATGKRYALRIDPWVD
ERRDPLKATVAAALYLKELYALFNNDWYLAAAGYNAGENKILRAINMYNTRDFWEISKGS
YLARETKDYVPKLLAAAIIAKEPAKHGFADVAYLPPIEFDVVKIPSRTDLEVVAKACGVS
VQTVRELNPALRRGSTPPDYPGYQLKVPKGTAASFETEYAKVPESERYTEKVKHVRYRAK
KKDTLVSIARRFKTTPQAIAELNDLGRKKAAKLHGRMLTVPVLVAAQGEAAPAPSTAEAK
AKAKEFHKYYTVKKGDTLASLAKRFNVTARVLSAWNNLKTKVALKPGKRIIVAKYQEKKG
AGERDSG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacgacccttatcatactgtcactgttgttctccaccaccgctttcgccgcg
tcggccggtacggccgccgaacagcgcgaacagcgcgacctggcccgggccatgcaggtc
gcctacaactcctccgacgtcgcgctctccaaagggctcggcctcaccccctcggatttt
tccgacgacgaagatttcagcgacgattcccaggattacgacctcaagctgccggagatg
gaacttcccgactccgacattccgcttaccttcaacaccaaggttgagtacttcgtccgc
tacttccaggggccggcgcgcccggtcttcgccaagtggctctcccgcagcgagcgctac
atcccgatgatgaagaccgtgctcaagaaggaggggctccccgaggatctggtctacctg
gcgatgatcgagagcggcttcatgacccacgcggtgtcggtggcgagcgcggtcggcccg
tggcagttcatgcccgcgaccggaaagcgctatgcgctgaggatcgacccctgggtcgac
gagaggcgtgatcccctgaaggccacggtcgccgcggcgctctacttaaaagagctctac
gccctgttcaacaacgactggtacctggcggctgcagggtacaacgcgggtgagaacaag
atcctgcgcgccatcaacatgtacaacacccgcgacttctgggagatctccaaggggagc
tacctggcccgcgagaccaaggattacgtcccgaagcttctggccgcggccatcatcgcc
aaggaacctgccaagcacggcttcgccgacgtggcctaccttccccccatcgagttcgat
gtggtgaagatcccgtcgcgcaccgacctggaagtcgtggccaaggcgtgcggggtctcg
gtgcagaccgtccgggagctgaaccctgcgctgcgccgcggttccaccccgcccgactac
ccggggtaccagttgaaagtacccaagggaacggcagcctccttcgagaccgagtacgcc
aaggtgccagagtccgagcgctacaccgaaaaggtgaagcacgtgcgctaccgcgccaag
aagaaggacaccctcgtctccatcgccaggcgcttcaagaccaccccgcaggccattgct
gagttgaacgacctggggcgcaaaaaggccgccaagcttcacgggcggatgctgaccgtc
ccggtgctggtggcggcgcagggcgaggcggcgccggctccgtccacggctgaggcgaaa
gcgaaggctaaggaattccacaagtactacaccgtcaagaagggcgataccctcgcctcc
ctggcaaagaggttcaacgtcacggcgcgggtgctctcggcctggaacaacctgaagacc
aaggtggcgctgaaacccggcaagcgcatcatcgtcgccaagtatcaggagaagaagggc
gccggggaacgggactcgggctag
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