Geobacter sp. M21: GM21_0913
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Entry
GM21_0913 CDS
T00933
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
gem
Geobacter sp. M21
Pathway
gem00020
Citrate cycle (TCA cycle)
gem00190
Oxidative phosphorylation
gem00650
Butanoate metabolism
gem00720
Other carbon fixation pathways
gem01100
Metabolic pathways
gem01110
Biosynthesis of secondary metabolites
gem01120
Microbial metabolism in diverse environments
gem01200
Carbon metabolism
Module
gem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GM21_0913
00650 Butanoate metabolism
GM21_0913
09102 Energy metabolism
00190 Oxidative phosphorylation
GM21_0913
00720 Other carbon fixation pathways
GM21_0913
Enzymes [BR:
gem01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GM21_0913
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
ACT16980
UniProt:
C6E1R1
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Position
1088471..1090384
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AA seq
637 aa
AA seq
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MILDGKCPKGPIQTSWDRHRFDLKLVNPANKRKYKILVVGTGLAGGAAAASLGELGYNVE
AFCYQDSARRAHSIAAQGGINAAKNYPNDGDSIYRLFYDTIKGGDFRAREADVWRLAQVS
NNIIDQCVAQGVPFARDYAGYLDNRSFGGAQVSRTFYARGQTGQQLLLGAYSALSRQVKA
GTVKLFARTEMLDLVVVDGEAKGITVRDLITGEIRTHVGDAVVLATGGYVNVFYLSTNAM
GCSVTANWRAHKKGAFFANPCYTQIHPTCIPQSGDHQSKLTLMSESLRNDGRCWAPKKKG
DNRHPNEIPEDERDYYLERKYPSFGNLAPRDIASRAAKEQCDDGRGVGPGGRGVNLDFSA
AIQRVGEDTIRERYGNLFEMYEKITDENAYKQPMRMYPAPHYSMGGLWVDYNCESNVPGL
FVLGEANFSVHGANRLGASALMQGLADGYFVIPYTIANYLAKTKPGAVKADHPECKKSIE
DVKSYNNRLLNINGKKTVSEFHRELGKIMWENVGMARSEETLKDAIKKIPVLREEFWKNV
KVTGKGEELNQQLENAGRVADFLEFGELMAKDALHRNESCGGHFRVEHQMPDGEAKRDDE
NYCYVGAWEFKGVDKEPELHKEPLAFDNVHLAVRSYK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgatactcgacggaaaatgtccgaaaggaccgattcagacctcgtgggacaggcaccgc
ttcgacctgaagctggtcaaccccgcaaacaagcgtaagtacaagatcctcgttgtcggc
accggcctggccggtggcgcagccgcagcctccttgggcgaactcggctacaacgtcgaa
gccttctgctaccaggacagcgcgcgtcgcgcccactccatcgcagcgcagggcggcatc
aacgccgcgaaaaactacccgaacgacggcgacagcatctaccgcctgttctacgacacc
atcaaaggcggcgacttccgtgctcgtgaggcggacgtgtggcgtctggcccaggtgtcc
aacaacatcatcgaccagtgcgtggcccagggtgtccccttcgcccgcgactatgccggt
tacctcgacaaccgctccttcggcggcgcccaggtttcccgtaccttctacgcccgcggc
caaacaggtcagcagctccttctgggcgcctactctgcactctcccgccaggtgaaggca
ggaaccgtgaagcttttcgcccgcaccgagatgctggacctcgtcgtagtcgacggcgaa
gcgaagggtatcaccgtacgcgacctgatcaccggcgagatccgcacccacgtgggtgac
gcggtcgtcctcgccaccggcggctacgtcaacgtgttctacctctccaccaacgcgatg
gggtgctccgtcaccgccaactggcgcgctcacaaaaaaggcgccttcttcgccaacccc
tgctacacccagatccacccgacctgcatcccgcagtccggcgaccaccagtccaagctg
accctcatgtccgagtcgctcagaaacgacggccgctgctgggctcccaagaagaagggt
gacaaccgtcaccccaacgagatcccggaagacgagcgcgactactacctggagaggaag
tacccctccttcggcaacctcgctccccgcgacatcgcctcgcgcgccgcgaaagagcag
tgcgacgacgggcgcggcgtcggccccggcggccgcggtgttaacctggacttctccgcc
gcgatccagcgtgtcggcgaggacaccatccgcgagcgctacggcaacctcttcgagatg
tacgagaagatcaccgacgagaacgcctacaagcagccgatgcgcatgtacccggcaccg
cattactccatgggcggcctctgggtcgactacaactgcgagagcaacgtcccgggcctg
ttcgttttgggcgaggcgaacttctcggtccacggcgctaaccgcctgggcgcctcggca
ctgatgcagggcctggccgacggctacttcgtcatcccctataccatcgccaactacctc
gccaagaccaagccgggcgccgtcaaggcggaccacccggagtgcaagaagtcgatcgag
gacgtgaagagctacaacaaccgtctgctcaacatcaacggcaagaagaccgtgtccgag
ttccaccgcgaactgggcaagatcatgtgggaaaacgtcggcatggcgagaagcgaggag
accctcaaggacgccatcaagaagatcccggtcctgcgcgaggagttctggaagaacgtc
aaggtcaccggcaagggcgaggaactgaaccagcagctggagaacgccggccgcgtggcg
gacttcctcgagttcggcgaactgatggcgaaggacgccctgcacaggaacgaatcctgc
ggcggccacttccgcgtcgagcaccagatgccggacggcgaggcgaagcgcgacgacgag
aactactgctacgtcggggcctgggagttcaaaggtgtcgacaaggagcccgaactgcac
aaggagccgttggcgttcgataacgtacatctggcggtaaggagttataaataa
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