Geobacter sp. M21: GM21_1445
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Entry
GM21_1445 CDS
T00933
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gem
Geobacter sp. M21
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gem03016
]
GM21_1445
Enzymes [BR:
gem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GM21_1445
Transfer RNA biogenesis [BR:
gem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GM21_1445
Prokaryotic type
GM21_1445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ACT17502
UniProt:
C6E4K4
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All DBs
Position
1701910..1703106
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AA seq
398 aa
AA seq
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MSIYLTAEVPGTGGVIKATPEDFLVEEIPAYLPSGQGEHCFAVLEKRGIATLEALRRLAK
ALGVQERDLGYAGMKDAIGITRQTISIPRVAPEKVLALEIPGITVLSASMHGNKLRLGHL
KGNRFVIRVRDVAQGAAGNAEAALEIMTRRGVPNRFGVQRYGAQGNTHEIGAAMLRREFK
SAVDRLIGDPAAVTDERWRLAIEAYRRGEVAESLALFPGHFRVERELLTRLVQRPDGFER
AFNSVQPRMKRLYLSAFQSSLFDLVLGKRLDSFDQVNVGDIAFKHENGACFLVQDLAAEA
PRAESFEISPTGPMFGCTMMESHGAQGELEREVLAAQELTLESFNLSGGLRMEGERRPLR
VPIAGAEVRQDGSDLLLDFSLPRGAYATCVLSEIMKSD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
ttgtctatatatctcacagccgaggtccctgggaccggtggcgtcatcaaagcaacaccg
gaagatttcctggtcgaggagattccggcctatctgccgagcgggcagggggagcactgt
ttcgcggtcctggaaaagcgcggcatcgcgacgcttgaggcgctgcgccgactcgctaag
gctctgggtgtccaggagcgcgatttgggctacgccgggatgaaggatgccattggcatc
acccgccagaccatttccataccgcgcgtggcgcccgagaaggtgctcgcgcttgaaatt
ccggggatcacggttctctcggccagtatgcatggcaacaagttgaggctcgggcatctc
aagggaaaccgtttcgtcatcagggtacgcgacgtcgcccagggcgcggccggaaacgcg
gaggccgcgctggagatcatgaccaggcgcggggtacccaaccgcttcggggtccagcgc
tacggtgcccaaggcaacacccacgagatcggggcggccatgctgcgccgcgagttcaag
tcggcggtggaccggctgatcggcgatccggctgcggtgaccgacgagcgttggcgtctg
gcgatcgaggcgtaccggcgcggggaagtggccgagagcctcgcgctgttcccgggacat
ttccgggtcgagcgcgagctgctcacccggttggtacagcggccggacggcttcgagagg
gccttcaactcggtgcagccgcgcatgaagaggctgtacctctccgccttccagtcctcg
ctcttcgacctggtgctgggaaaaaggctcgacagcttcgatcaggtgaacgtcggcgac
atcgccttcaagcatgagaacggcgcctgttttctggtgcaggacctggcggcagaggcg
ccgcgtgccgaaagcttcgagatttcgcccaccggtcccatgttcggctgcaccatgatg
gagtctcacggcgcacagggcgaactggagcgggaggtgctggcagcgcaagagctgacc
ctggagagcttcaacctctccggtgggctccgtatggaaggggagcggcgtcccttgcgg
gtgcctatcgccggggcggaggtgcggcaggatggttccgacctcttgctcgacttctcg
ctgccgcgaggcgcctacgccacctgcgtgctgagcgagataatgaagagcgactga
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