Geobacter sp. M21: GM21_1529
Help
Entry
GM21_1529 CDS
T00933
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gem
Geobacter sp. M21
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gem03032
]
GM21_1529
03400 DNA repair and recombination proteins [BR:
gem03400
]
GM21_1529
Enzymes [BR:
gem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GM21_1529
DNA replication proteins [BR:
gem03032
]
Prokaryotic type
DNA Topoisomerases
GM21_1529
DNA repair and recombination proteins [BR:
gem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GM21_1529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DNA_ligase_ZBD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ACT17585
UniProt:
C6E556
LinkDB
All DBs
Position
1792492..1794831
Genome browser
AA seq
779 aa
AA seq
DB search
MSQNLVIVESPAKAKTIEKFLGHDYKVLASFGHVRALPSKQGSVDTEHDFEPKYAVLPES
KKHIDAIKKEMKGISSLLLATDPDREGEAISWHLLAALGLDGKKKLPFEIKRVVFHEITK
DAIVHAVENPRDIALDLVDAQQARSILDYLVGFTLSPFLWKKIRYGLSAGRVQSVALRLI
CEREKEIQAFKEQEYWTIAAKLETAKKQGLTATLVEAEGKKLGKFDIPDQETAYRHFAKL
GGKEFPPQEGDESGKPLTVEHPAHPEYRVDKVTKSERKRQPSPPFTTSTLQQEAARKLGF
SAKKTMSTAQKLYEGIDVGEGAVGLITYMRTDSVALSNVALEEAKSVITSLYGKEYALEK
PRFFKNKSKNAQEAHEAVRPTYIAKTPVELKKFLSSDQFKLYDLIWKRTVACQMAEALLD
QTSVDIGAGEGFRFRVAGTVIRFAGFMKLYIEGVDDEAEDKDKEGLLPPLAEGDILKLQQ
LLPERHFTQPPPRYTEASLVKTLEEYGIGRPSTYASIMNTLTERKYARLDKKRFFPEDVG
MVVSDLLTNHFTQYVDYNFTANLEEELDMVSRGEKQWRPLLHEFWGPFINLLKLKEGEVN
KSDLTTEATNEVCPECGKPLVVKLGKFGKFYACTGYPECRYIRPLDKETGEVVEPVVSEE
ICDKCGSHMLIKDGRFGKYLACSAYPNCKNIQPLVKPKGTGITCAECGKGELIEKKSRFG
KLFYSCNRYPECKFALWDLPVQQPCPKCGFPLLIKKVYKREGEFLKCPKEGCDYKSNQS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaatctcgtcatcgttgagtctcccgccaaggcgaagaccattgaaaaattc
ctcggccacgactacaaggtcctggcctcgttcggtcacgtgcgcgccctccccagcaag
caggggtcggtggacacggagcacgacttcgagccgaagtacgccgtcctccccgagagc
aaaaagcacatcgacgccatcaagaaggagatgaagggaatctcctcgctcctcttggcg
acagaccccgaccgcgaaggggaggcgatctcctggcaccttttggccgcgctcggcctg
gacgggaagaagaagcttccgttcgagatcaagcgggtggtcttccacgagatcaccaag
gacgccatcgtgcatgcggtggaaaatccccgcgacatcgcccttgacctggtggatgcc
cagcaggcccgctccatcctcgattacctggtcggcttcaccctctctccttttctttgg
aagaagatccgctacggactttccgcggggcgggtgcagtcggtcgcactgaggctcatc
tgcgagcgcgagaaggagatccaggccttcaaggagcaggagtactggaccatcgccgcg
aagctcgagaccgccaagaagcaggggctcacggccacgctggtggaggccgaggggaag
aagctaggcaagttcgacatccccgaccaggaaacggcctaccggcacttcgccaagcta
ggggggaaggaattcccgccgcaggaaggggacgagtcgggaaaaccgctgacggtcgag
cacccggcgcaccccgagtaccgggtcgacaaggtcaccaagagcgagagaaagcgccag
ccttctccccctttcaccacctccaccttgcagcaggaggcggcgcgcaaactcggcttc
tccgccaagaagaccatgtccacggcccaaaagctctacgaggggatcgacgtcggcgaa
ggggccgtaggtctcatcacctacatgcgtaccgactccgtcgccctttccaacgtggcg
ctggaagaggcaaagtcggtgatcacctcgctctacggcaaggaatacgcgctggagaag
ccgcgcttcttcaagaacaagtccaaaaacgcccaggaagcgcacgaggcggtccgcccg
acctacatcgccaagaccccggtcgagctgaagaagttcctgagcagcgaccagttcaag
ctctacgacctgatctggaagaggactgtcgcctgccaaatggccgaggcgctcctggac
cagacctcggtcgatatcggcgcgggagaagggttccgcttccgggtcgcaggcaccgtg
atccgcttcgccggcttcatgaagctctacatcgaaggggtcgacgacgaggcggaggac
aaggataaggaagggctgctcccgcctttggccgagggggacatcctcaagctgcagcag
cttctccccgagcggcacttcacccagcccccgccgcgctacaccgaggcgagtctggtg
aagaccctggaggagtacggcatcgggcgcccgtccacctacgcctccatcatgaacacc
cttaccgagagaaagtacgcgcgcctggacaagaagcgcttcttccccgaagacgtaggg
atggtggtctccgaccttttgaccaaccacttcacccagtacgtcgactacaacttcacg
gcgaacctggaggaagagctcgacatggtctcgcgcggcgagaagcagtggcgcccgctc
ctgcacgagttctggggtcccttcatcaacctcttgaagctgaaggaaggggaggtgaac
aagtcggatttaaccaccgaggcgaccaacgaggtctgccccgagtgcggcaagcccctg
gtggtgaagctcggcaagttcggcaagttctacgcctgcaccggttatcccgaatgccgt
tacatccgaccgttggacaaggagacgggcgaggtggtcgagcccgtggtttccgaggaa
atctgcgacaagtgcggcagccacatgctgatcaaggacgggcgtttcggcaagtatctg
gcctgttccgcctaccccaactgcaagaacatccagccgctggtgaagcccaagggtacc
gggatcacctgcgccgaatgcggcaagggggagctgatcgagaagaagtcccgtttcggc
aagctcttctactcctgtaaccgctaccccgagtgcaagttcgccctgtgggatctcccg
gtgcagcagccctgtcccaagtgcggcttcccgctcctcatcaagaaggtctacaagcgc
gagggggaattcctcaagtgcccgaaggaagggtgcgactacaagagcaaccagtcctag
DBGET
integrated database retrieval system
