Geobacter sp. M21: GM21_2084
Help
Entry
GM21_2084 CDS
T00933
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gem
Geobacter sp. M21
Pathway
gem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GM21_2084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gem03400
]
GM21_2084
Enzymes [BR:
gem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GM21_2084
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GM21_2084
DNA repair and recombination proteins [BR:
gem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GM21_2084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
RNHCP
Zn_ribbon_IS1595
LRR_FBXL18
zf-dskA_traR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ACT18136
UniProt:
C6E941
LinkDB
All DBs
Position
complement(2418215..2419030)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVEVTRLGIAAQLVGARIAAVAVHSPKLRTLVPPELPSILAGQSILSLTRRGKYL
IITCRQGSLLLHLGMTGHLRLVPAGAGAGAHDHFDLVLESGLILRLNDVRRFGSIHFTSG
DPLKHKLLRGIGPEPLTDELTGHYLYRKSRGKKAPLQRFLMDSSVVAGLGNIYAAETLFR
CGMLPFTQAGSLSEGDCDRLCDCIKKTLAASIEAGRVMDFTVREEKLVYFPQQLYVYGRE
GLACRECGSAIERGRLGNRSTFHCPRCQSRL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattacccgaagtcgaagtgacccggctggggatcgcagcacaactggtcgga
gccaggatcgccgctgtcgccgttcacagccccaaactgcgcaccctggtgccgccggaa
ctgccgagtattctcgccggccagagcatcctttcactgacccgtcgcggcaagtacctg
atcattacctgccggcagggctccttgctgctgcaccttggtatgaccgggcacctgcgc
ctggtccccgcgggcgccggcgccggcgcgcacgaccacttcgacctggtgctggagtcc
gggctcatactgcggctcaacgacgtgcgccgcttcggctcgattcacttcacctccggc
gatccgctaaagcacaaacttttgcggggaatcgggccggaacccttgaccgatgagctc
accggtcactacctctaccgcaaaagccgcggcaagaaggcgcccctgcagcgcttcctg
atggacagctccgtggtcgccggtctcggcaacatctacgcggcagagacgctgtttcgc
tgcggcatgcttccgttcacgcaggcgggctccctctccgagggcgactgcgacaggctt
tgcgactgtatcaagaaaaccctcgccgcctccatcgaggccggtcgcgtcatggatttc
accgtccgcgaggagaagctcgtctatttcccgcagcagctctacgtctacggcagggaa
gggctcgcctgccgggagtgcggcagcgccattgagcggggaaggctcggcaaccgctcc
accttccactgcccccgctgccagagccggctttaa
DBGET
integrated database retrieval system
