Geobacter sp. M21: GM21_2976
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Entry
GM21_2976 CDS
T00933
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gem
Geobacter sp. M21
Pathway
gem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM21_2976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gem03019
]
GM21_2976
03016 Transfer RNA biogenesis [BR:
gem03016
]
GM21_2976
Enzymes [BR:
gem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GM21_2976
Messenger RNA biogenesis [BR:
gem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GM21_2976
Transfer RNA biogenesis [BR:
gem03016
]
Prokaryotic type
tRNA degradation factors
GM21_2976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
MRS2-like
Motif
Other DBs
NCBI-ProteinID:
ACT19005
UniProt:
C6E2P5
LinkDB
All DBs
Position
complement(3457299..3459389)
Genome browser
AA seq
696 aa
AA seq
DB search
MVHTVQAECCGKTITIETGKIAKQASGAVMIKSGDTMVLVTAVAMKSAKEGQGFFPLTVN
YQEKAYAGGRIPGSFFKREGRPSDNETLTCRLIDRPIRPLFPEGFLNDTQVMATVVSADK
DNDPAILSMIGASAALMVSDCPFAGPIAGVKVGRVNGAFIANPTAEELEKSDLEIVIAAS
QEAILMVEGSAAEVSENDLLEAIFFGHAAVQPILAAQLELAKKVGTPKRVILAPVVNEEL
KARVAALAKEGMKQAVRIKTKVERHLAIDAITAETVAALAAEFEGSEKEVKGFIEDLEYD
LVREHIIKDGQRIDGRDTKTIRAISTEVSLLPRAHGSALFTRGETQSIVAATLGTSVDEQ
RIDSLYGDSRKKFMLHYNFPPYSVGETSFRLAPGRREIGHGMLAERALQQVLPKHDDFPY
TIRIVSDITESNGSSSMATVCGGSLSMMDAGIPIKAPVAGIAMGLIKEGDDFAILSDILG
DEDHLGDMDFKVAGTAEGVTALQMDIKIGGVTREIMSAALAQAKAGRIHILGEMAKTIAA
SRGDLSAFAPRITTIWVKVDKIRDVIGSGGKNIRSVTEATGVSIDIDDTGKINIASTNKE
ACDLAIKMIRNLTAEAEEGKLYMGTVKKIMEFGAFVEIFPGTDGLVHVSELDTERVKNVS
DILKEGDKVLVKCIGIDKQGKIKLSRKEALGQTFTE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggtacacaccgtacaggcagaatgctgtggcaagacaatcacaatcgaaacgggaaag
atcgcgaagcaggcaagcggcgcggtcatgatcaaaagcggcgacaccatggtgctcgtc
accgccgtcgccatgaagagcgccaaggaagggcagggcttcttcccgctcaccgtcaac
taccaggagaaggcgtacgcggggggccgcatccccggatccttcttcaagcgcgagggg
cgtccctccgacaacgagaccctgacctgccgtctcatcgaccgcccgatccgtccgctg
ttccctgaagggttcctgaacgatacccaggtcatggcgaccgtggtctcggccgacaag
gacaacgacccggctatcctctccatgatcggcgcttctgccgccctgatggtctccgat
tgcccgttcgcaggccccatcgccggcgtcaaggtcggccgcgtaaacggcgctttcatc
gccaacccgaccgccgaagagctggagaaaagcgacctcgagatcgtgatcgccgccagc
caggaagcgatcctgatggtggaaggttccgccgccgaggtctccgagaacgacttgctg
gaagcgatcttcttcggccacgccgctgtgcagccgatactggccgcccagctcgagctc
gccaagaaggtgggcacccccaagcgcgtgattctggctccggtcgttaacgaagagctg
aaggcccgcgtggccgccctcgccaaagaggggatgaagcaggcggtccggatcaagacc
aaggttgagcgccacctggctatcgacgccatcactgccgagaccgtcgcggcccttgcc
gccgagttcgaaggttccgagaaggaagtaaagggattcatcgaagacctcgagtacgac
ctggtgcgtgagcacatcataaaggacggccagaggatcgacgggcgcgataccaagacc
atccgcgccatctccaccgaagtaagcctgctcccccgcgctcacggctccgccctgttc
acccgcggcgagacccagtccatcgtggcggcgacgcttggcacctcggtcgacgagcag
cgcatcgactcgctttacggtgactccaggaagaagttcatgctgcactacaacttccct
ccgtactccgtcggcgagaccagcttccgcctcgctccggggcgccgcgagatcggccac
ggcatgcttgccgagcgcgccctgcagcaggtgcttccgaagcatgacgacttcccctat
accatcaggatcgtctccgacatcaccgagagcaacggctcctcctcgatggcgaccgtc
tgcggcggctcgctgtccatgatggacgccggcatcccgatcaaggcgccggttgccggc
atcgccatgggcctcatcaaagaaggcgacgatttcgccatcctctccgacatcctcggc
gacgaagaccacctgggcgacatggacttcaaggtggcgggtaccgccgaaggcgtcacc
gcgctgcagatggacatcaagatcggcggcgtcacccgcgagatcatgagcgcggcgttg
gctcaggccaaagcaggcaggatccacatcttgggcgagatggccaagaccatcgcggca
tcgcgcggcgacctctccgccttcgcgccgcgcatcaccaccatatgggtcaaggtcgac
aagatccgcgacgtcataggctccggtggcaagaacatcaggagcgtcaccgaggcgacc
ggcgtctccatcgacatcgacgacaccggcaagatcaacatcgcttccaccaacaaggaa
gcctgcgacctcgccattaagatgatcaggaacctcaccgccgaggccgaggaaggaaag
ctctacatgggcaccgtgaaaaagatcatggaattcggcgccttcgtggagatcttcccg
ggaaccgacggcctggtccacgtctccgagctcgacaccgagcgcgtcaagaacgtgagc
gacatcctcaaagagggcgacaaggtcctggttaagtgcatcggcatcgacaagcagggc
aagatcaagctctcccgtaaagaggctctgggacagactttcaccgaataa
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