Geobacter sp. M21: GM21_3301
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Entry
GM21_3301 CDS
T00933
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gem
Geobacter sp. M21
Pathway
gem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GM21_3301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gem03021
]
GM21_3301
03400 DNA repair and recombination proteins [BR:
gem03400
]
GM21_3301
Enzymes [BR:
gem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GM21_3301
Transcription machinery [BR:
gem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GM21_3301
DNA repair and recombination proteins [BR:
gem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GM21_3301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ACT19326
UniProt:
C6E4N0
LinkDB
All DBs
Position
complement(3837501..3838520)
Genome browser
AA seq
339 aa
AA seq
DB search
MYRNWRDLIRPKKLQVETESLTNTYGKFFAEPFERGFGTTLGTGLRRVLISSLQGAAIVS
VKAKGVLHEFSAVPGVTEDMTDIILNLKGVRLKVHGNESRMIRIVQKGEGVVKAKDIITD
NNVEILNPEHHIATCSKDANLEMDLMVKVGKGYVPADRNRDEKAPVGTIPIDAIFSPVHK
VNFTVTNARVGQITDYDKLTIELWTDGSVKPQDAVAYASKILKDQLSIFINFDEDVEPQE
EAEPEEERERFNENLYRSVDELELSVRSANCLKNAGIKLIGELVSRSEAEMLKTQNFGRK
SLNEIKDILVDMGLTLGMKLENFPDPEIMRRLRGEQKEE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaaactggcgcgatctgatcagacctaagaagctccaggttgagacggaatcg
ctcacaaatacatacgggaagttctttgccgaacccttcgaaaggggcttcggcaccacc
ctgggaacaggtctgcgtcgggtcctcatctcgagcctgcagggggcagccatcgtctcc
gtgaaggcgaagggcgtactgcacgagttctccgcagtcccgggcgtgaccgaggacatg
acggacatcattctgaacctcaagggtgtgcgcctcaaagtgcacggcaacgagtccagg
atgatcaggatcgtccagaagggcgaaggtgtggtcaaggccaaggacatcatcacggac
aacaacgtggagatcctgaaccccgagcaccacatcgcgacctgctccaaggacgcgaac
ctcgagatggacctcatggtcaaagtcggcaaagggtacgtccccgctgaccgcaaccgt
gacgagaaggctccggtcgggaccatccccatcgacgcgatcttctccccggtccacaag
gtgaacttcaccgtaaccaacgctcgcgtaggtcagatcaccgactacgacaagctcacc
atcgagctctggaccgacggcagcgtcaagccgcaggacgccgtggcctacgcttccaag
atcctcaaggaccagctttccatcttcatcaacttcgatgaggacgtggagccccaagag
gaggcggaaccggaggaggagcgcgagcgcttcaacgagaacctgtaccgctcagtggac
gagctggaactctcggttcgctccgcgaactgcctgaagaacgcagggattaagctgatc
ggcgaactcgtttccagaagcgaagccgagatgcttaagacccaaaacttcggcaggaaa
tctctgaacgaaatcaaggacatcctcgtcgacatgggcctcaccctcggcatgaaactg
gagaattttccggatcccgagatcatgaggcgcctgcgcggcgagcagaaagaagaatag
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