Geobacter sp. M21: GM21_3350
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Entry
GM21_3350 CDS
T00933
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gem
Geobacter sp. M21
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gem03016
]
GM21_3350
Enzymes [BR:
gem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GM21_3350
Transfer RNA biogenesis [BR:
gem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GM21_3350
Prokaryotic type
GM21_3350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ACT19375
UniProt:
C6E4S9
LinkDB
All DBs
Position
complement(3876931..3877674)
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AA seq
247 aa
AA seq
DB search
MRNIKLIIEYDGTAYCGWQVQPNGRTVQEALEEALASMLGGKTALHGSGRTDAGVHARGM
VACFQTDKGMPLRAFREGLNCLLPADIAVREACEVPLEFHPRFDALAKHYRYTMLLDDLR
SPLSRLTAWRLKGKLDVDAMRSACAAFVGEHDFAAFRASNCAAKTTVRRIYSMDLVQEGP
FLHLDVKGSGFLKNMVRIITGTLIEVGQGKKSVEDVARLLKGSDRQQNSGMTVPPQGLCL
MQVYYPE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacatcaagctgatcatagagtacgacggcaccgcctactgcggctggcaggtg
cagccgaacggacgcacggtccaggaggcgctggaggaggcgctcgcatccatgctgggg
gggaagaccgccctgcacggctccgggcgcaccgacgcgggcgtgcacgcgcgcggcatg
gtggcctgtttccaaacggacaagggcatgccgctgcgcgccttccgtgaggggctcaat
tgcctgcttccagccgacatcgcggtgcgggaggcgtgcgaggtcccgctggagttccat
ccccgcttcgacgcgctggcgaagcattaccgctacaccatgctcttggacgacctgcgc
tccccgctttcgcgcctcaccgcctggcgcctcaagggtaagctcgacgtcgatgccatg
cgctccgcctgcgccgccttcgtcggcgagcacgacttcgccgccttccgggcttccaac
tgcgccgccaagaccacggtgcgcaggatctacagcatggacctcgtgcaggaggggccc
tttctccacctggacgtcaaggggagcggctttctgaagaacatggtccgtatcatcacc
gggaccctgatcgaggtggggcaggggaagaaaagcgtcgaggatgtggcgcgactgctt
aaggggagcgatcggcagcagaattccggcatgacggtgcctccgcaggggctttgcctg
atgcaggtttactacccggagtga
DBGET
integrated database retrieval system
