Geobacter sp. M21: GM21_3413
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Entry
GM21_3413 CDS
T00933
Name
(GenBank) Three-deoxy-D-manno-octulosonic-acid transferase domain protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
gem
Geobacter sp. M21
Pathway
gem00540
Lipopolysaccharide biosynthesis
gem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GM21_3413
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gem01005
]
GM21_3413
Enzymes [BR:
gem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
GM21_3413
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
GM21_3413
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
GM21_3413
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
GM21_3413
Lipopolysaccharide biosynthesis proteins [BR:
gem01005
]
Lipid A
GM21_3413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_4_4
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
ACT19437
UniProt:
C6E5B3
LinkDB
All DBs
Position
complement(3944936..3946237)
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AA seq
433 aa
AA seq
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MIDFIYNLLLWLLLPLLVPYHAYRSLSRGRRTAFMERFGVIPEAELEPIKGKRTILVHAV
SVGETLAAQPLLKGIRSRFPEHRVVITNVTETGRGVALKSNSADVCIYFPFDYPFAVRAV
LNKVRPDLVVIMETEIWPNFIKEARVLGIPVLLANGRISDRSLSRYLRFSWFFRPVLQKL
SALCMQSAEDASRIEAIGARPETVHVAGNLKYDIPLRPKNPEQASGVKAKYGIPERAFVF
TAASTHEGEEGFVLEAYRMLLSARPESFLILAPRHPERAAGVAEQVKKSGLTFRRRSQME
AEPAPQQPGEVFVLDTVGELAGLYGASDLVFVGGSLVPTGGHNPLEPAACGIPVLFGPHM
ENFREIAATFLAKKAGIQLAGAAELGEKLVSLSGDAAGRDRMGGNGAGILAESAGSTTRH
VDAMAACLGANRG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacttcatttacaacctgctgctctggctgcttttgccgctgctggtcccctac
catgcctaccgctccttgagccgggggaggcgcaccgcctttatggagcgcttcggggtt
atccccgaagccgagctggagcctatcaaaggcaagaggaccatcctggtccacgccgtc
tcggtgggggagaccctcgccgctcagccgctcctcaaggggatccgttcgcgcttcccc
gaacaccgggtcgtgatcaccaacgtcaccgagaccggccgcggcgtcgccctcaaaagc
aactccgccgacgtctgcatctatttccccttcgattaccccttcgccgtacgcgcggtc
ctcaacaaggtgaggcccgacctcgtggtcatcatggagaccgagatctggcccaacttc
atcaaggaggcgcgcgtattgggcatcccggtgctgcttgccaacggccgtatctcggac
cgctcgctttcgcgttacctccgcttctcctggttcttccgcccggtcctgcaaaagctg
tccgccctctgcatgcaaagcgccgaggacgcaagccgcatcgaggccatcggtgcgcgg
ccggagacggtccacgtcgcgggaaacctgaagtacgacatcccgctgcggccgaagaac
ccggagcaggcgtccggggtgaaggcgaagtacggcatccccgaaagggctttcgtcttc
accgccgccagcacccacgagggggaggagggtttcgtccttgaggcgtaccgcatgctc
ttgtcggcgcggccggagagtttcctcatcctcgccccgcgccatccggagcgcgccgcg
ggcgtcgccgaacaggtgaaaaagagcgggcttaccttccggcgccgctcgcagatggag
gcggaacccgcgccgcagcagccgggagaggtgttcgtactcgacacggtcggcgaactc
gccgggctttacggcgcctcggacctcgttttcgtcggcggctcgctggtcccgaccgga
gggcacaacccgctggagcccgcggcctgcggcatcccggtcctcttcgggccgcacatg
gagaacttccgcgagatcgccgccaccttcctcgccaagaaagcgggcattcagctcgcc
ggagcggctgaactgggggagaagctcgtctccctctccggcgacgcagccggccgggac
cggatgggaggcaacggcgcggggatcctcgccgaaagcgccggctccaccacgcgccac
gtcgacgcgatggcggcatgcctgggggcaaatcgtggctga
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