Geminocystis sp. NIES-3709: GM3709_1160
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Entry
GM3709_1160 CDS
T04142
Name
(GenBank) carotenoid cis-trans isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
gen
Geminocystis sp. NIES-3709
Pathway
gen00906
Carotenoid biosynthesis
gen01100
Metabolic pathways
gen01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
GM3709_1160
Enzymes [BR:
gen01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
GM3709_1160
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GIDA
FAD_oxidored
Pyr_redox_2
HI0933_like
FAD_binding_3
Thi4
ImmE5
Lycopene_cycl
Pyr_redox_3
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
BAQ64395
UniProt:
A0A0D6AP03
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Position
1315836..1317329
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AA seq
497 aa
AA seq
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MSHYDVIVIGSGIGGLVTATQLASKGINVLVLESYTIPGGSAGYFEREGYRFDVGASMIF
GFGENGTTNLLTRALDAVNQKMETIADPVQIHYHLPNNLDLKVHRDYDKFLQELYDRFPE
EEKGIKSFYDECWYVFNCLNSMELLSLEEIRYLTRVFFQHPLSCLGLVKYLPLNVGDVAR
KYIKNPELLKFIDMECYCWSVVPADLTPMINAGMVFSDRHYGGINYPKGGVGKIGETLAQ
GLEKLGGEIQYQARVTEIILEGNQAKGVRLANGKEYFAKRIVSNATRWDTFDKLIDKSKK
PKKEVKWQKNYRQSPSFLSLHLGVEAKVLAHHPECHHIILENWRNLEAEQGTIFVSIPTL
LDPSLAPEGYHIIHAFTPSSIEYWEELSPTQYESKKEEVAGRLIERLEVIFPGLDAGLDY
MEIGTPRTHRKFLGRINGTYGPIPAKRLNGLLSMPFNRTAIKNLYCVGDSTFPGQGLNAV
AFSGFSCAHRIAVDLGY
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattatgatgtcattgttattggttcaggtattggcggtttagtcacagcaact
caattagcctcaaaagggatcaatgtcttagtattagaaagttacactatccccggcgga
agtgcggggtattttgagcgggaaggataccgttttgatgtgggtgcttccatgattttt
ggttttggcgaaaatggtactactaacttacttacccgtgccttagatgctgttaatcaa
aaaatggagacgatcgccgatccagtacaaattcactatcatttacccaataacctcgat
cttaaagttcatagagattatgacaagtttttacaagaattatacgatcgttttcctgaa
gaagaaaaaggtataaaaagtttttatgatgagtgttggtatgtttttaattgtctcaac
tcgatggagttattatctttagaggaaattcgttacttaactagagtattttttcaacac
cctttatcctgtcttggcttagtcaaatatttacctttaaatgtgggtgatgtagcaagg
aaatatattaaaaatcctgaattgcttaaatttatcgatatggagtgttattgttggtcg
gttgtacctgctgatttaactcccatgattaacgccggaatggtattttccgatcgacac
tatggaggaataaactatcctaaaggaggagtaggtaaaataggagaaactttagcacaa
ggattagaaaagttagggggagaaatccagtatcaagcaagagtaaccgaaattatcctc
gaaggaaatcaagccaaaggagttagattagccaacggcaaagaatattttgccaaaaga
attgtctctaatgctactcgttgggatacttttgataagttaatcgacaaaagtaaaaaa
cccaaaaaagaagtaaaatggcagaaaaattatcgtcaatcacctagttttctaagtctt
catttaggagtggaagccaaagttttagcccatcatcctgaatgtcatcatattatattg
gaaaactggcgcaacttagaagcagagcaaggcacaatttttgtttctatacctacttta
cttgatcccagtcttgcccccgaaggttatcatatcattcatgcctttaccccaagctcg
atcgaatattgggaagaattatcccccacccaatacgagagtaaaaaagaagaagttgcg
gggagattaattgagcgtttagaagttattttccccggattagatgcaggtttagactat
atggaaattggtacacctcgcacccacagaaaatttttaggtagaattaatggtacttat
ggacccattcctgccaaaagactcaatggtttattatcaatgccttttaatcgcactgct
atcaaaaatctttactgtgtgggagacagcacatttccagggcagggtttaaatgccgtc
gctttttctgggtttagttgcgcccatcgtatcgccgttgacttgggctattaa
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