Geminocystis sp. NIES-3709: GM3709_1233
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Entry
GM3709_1233 CDS
T04142
Name
(GenBank) hypothetical protein
KO
K11720
lipopolysaccharide export system permease protein
Organism
gen
Geminocystis sp. NIES-3709
Pathway
gen02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GM3709_1233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gen02000
]
GM3709_1233
Transporters [BR:
gen02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
GM3709_1233
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
YVC1_C
Motif
Other DBs
NCBI-ProteinID:
BAQ64468
LinkDB
All DBs
Position
complement(1397124..1398239)
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AA seq
371 aa
AA seq
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MDVYLVRELMSPFFFGVALFSALGVAIATLSDLSYKIVNSNLPLISAIEIFCLKIPEYIA
YALPISLLLTTLITYSRLSNDNELIALRSTGVSLFRLIIPALIFSLLITFLTFVFNELIV
PNANYKVTTILVDKLNEQRKFLLRQDIFYPEYIQVQEENGRATKQLKTLFYAQAFDGENM
KSVTILDTEKKTLNKVIISEKGRWNSRSQVWDLFNGVIYNIKETPLAGKEYFFRQTQISL
SKTPLELASKSRDPYEMNIAQSQEYIRLLRLLGDEKTVLMFQVRTAQKIAFPFVCIIFAL
VGSSLGSRPNSASKATGFGICVAIVFGYYFIGFMIGSLGLIGVISPFMAAWIPNILGFSI
GIYLLFKPNFA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttatttggtaagagagttgatgagtccctttttctttggtgtagcacttttt
tctgctctaggtgttgcgatcgcaaccttatctgatttaagttataaaattgttaactcc
aacttaccattaatctctgccatcgaaatattttgcttaaaaatacctgaatatatagcc
tatgctttacccatatcacttttattaaccactttaatcacctatagtcgtttaagtaac
gataacgaattaattgccttgagaagtacaggagttagcctttttcgactaattattcca
gccttaattttcagcttattaattacttttttaacctttgtttttaacgaattaattgtt
ccaaatgctaactataaagttaccactattttagtggataaacttaatgaacaaagaaaa
tttttattgagacaagatattttttatcctgaatatattcaagttcaagaagaaaatgga
agagcaacaaaacaactaaaaacattattttatgcccaagcatttgacggagaaaacatg
aaatctgtgactattttagacacagaaaaaaagacattaaataaagtaataatatcagaa
aaaggacgctggaatagcagatctcaagtgtgggatttatttaatggagtaatctacaat
atcaaagaaactcccttagcagggaaagaatatttttttagacaaacgcaaatttcttta
tccaaaactcccttagaattagcttctaaaagtcgagatccttacgaaatgaatattgca
caatctcaagaatatattagattattaagattattaggagatgaaaaaactgttttaatg
tttcaagtcaggactgctcaaaaaattgcttttccttttgtttgtattatatttgcttta
gttggatcttctttaggttctcgtccaaatagtgccagtaaagccactggttttggtatc
tgtgtagccattgtttttggttactattttatcggttttatgattggtagtttaggatta
attggtgttatttctcctttcatggcagcttggataccgaatattttaggtttttcgatc
ggcatttatttactatttaaacctaattttgcttaa
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