Geminocystis sp. NIES-3709: GM3709_1303
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Entry
GM3709_1303 CDS
T04142
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
gen
Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gen03016
]
GM3709_1303
Transfer RNA biogenesis [BR:
gen03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
GM3709_1303
Prokaryotic type
Methyltransferases
GM3709_1303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Ras
GTP_EFTU
Roc
AIG1
Dynamin_N
RsgA_GTPase
MCM
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
BAQ64538
LinkDB
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Position
1468883..1470262
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AA seq
459 aa
AA seq
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MKTIIQQETIVAIASAVVPNQGSIGIVRLSGVTALDITQKIFIPQGKPSWESHQILYGYI
KNPDTSQIIDEVLVLLMLSPRSFTREDVIEFHCHGGIIPVQQVLELCLEKGARLANAGEF
TLRAFLNGRIDLTQAESIAEIVGAKSPQASHIALAGLQGKLAQPIRQMRHSLLDILAEVE
ARIDFEDDLPPLDETKIKQDLEDSLAQIKRILATKDQGELLRSGIKVAIVGRPNVGKSSL
LNAWSKSDRAIVTDLPGTTRDVVESQLVVQGIPIQVLDTAGIRETEDTVEKIGVERSLKA
VSQADLILFTIDASTGWTQEDHEIYQQIQELNLILVINKIDIAPSETIKYPSNISQVVTT
AVALNKGIQALENAIITTIKKGETTAQDLDIAINQRQAAALTRAKIALNQVQETIDNKLP
LDFWTIDLRIAIQALGEITGDDVTESVLDRIFSRFCIGK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacaataattcaacaagaaacgatcgtagcgatcgcatccgccgttgtcccaaat
cagggtagtataggcatcgtcagattaagtggtgtaacagcgttagatattactcaaaaa
atttttatcccccaaggtaaaccgtcatgggaatcccatcaaattctttacggttatatt
aaaaatcccgacacaagtcaaattattgacgaagttttagtattattaatgctctctcct
cgctcttttacgagagaagatgtcatcgaatttcactgtcacggaggaattataccagta
cagcaagtactagaattatgcttagaaaaaggtgcaagacttgctaatgcaggagaattt
accctaagagcttttttaaatggtagaattgatttaactcaggcggaaagtattgccgaa
attgtcggggcaaaatccccacaagcctctcatattgctttagctggtttacaaggaaaa
ttagctcaaccgattcgacaaatgcgtcattctttgttagatattttggcagaagtagag
gcaagaattgattttgaggatgatttacctccccttgatgaaacaaaaattaaacaagat
ttagaagatagtctagctcaaattaaacggattttagccaccaaagatcaaggagaatta
ttacgcagtggtattaaagtagctattgtggggcgtccaaatgtcggcaaatccagcctt
ttaaatgcttggagtaaaagcgatcgagccattgtcacggacttacccggaacaaccaga
gatgtggtagaatctcagttagtggtgcaaggtatccccattcaagtattagataccgcc
ggaattcgagaaacagaagacaccgtcgaaaaaattggtgtagaacgatcgcttaaagca
gtatcacaagcagatttaattttatttaccatcgatgctagtacaggatggactcaagaa
gatcacgaaatttatcaacaaattcaagaattaaacctaattcttgtcatcaataaaatt
gatatagccccttcagaaacgattaaatacccctctaatatctctcaagtagttactacc
gcagttgccctaaacaaaggcatacaagccttagagaatgccattatcacaacaattaaa
aagggagaaaccaccgcccaagatttagacattgcgattaaccaaagacaagccgccgcc
ctcactcgtgcaaaaatagctttaaatcaagtacaagaaactattgataataaactcccc
ctcgatttttggacaattgacttacgcattgctattcaagcattaggggaaataacagga
gatgatgtaacagaatcagtcctcgatcgtatttttagccgtttttgcatcggaaaataa
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