Geminocystis sp. NIES-3709: GM3709_1317
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Entry
GM3709_1317 CDS
T04142
Name
(GenBank) ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gen
Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gen03009
]
GM3709_1317
Enzymes [BR:
gen01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GM3709_1317
Ribosome biogenesis [BR:
gen03009
]
Prokaryotic type
ribosomal protein modification factors
GM3709_1317
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Thioredoxin_6
7TMR-DISMED2
Motif
Other DBs
NCBI-ProteinID:
BAQ64552
UniProt:
A0A0D6ANX5
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Position
1482737..1484056
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AA seq
439 aa
AA seq
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MGNKPTIAVSHLGCEKNRIDSEHMLGLLARSGYPIDNTEELADYVIVNTCSFIESARQES
VRTLVELAENQKKIIISGCMAQHFQEELLAELPEAVALVGTGDYQNIVEIIERVETGERV
KAVSAEPTFIADENIPRYRTTSEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVK
EAQQLADEGVKELILISQITTNYGVDLYGEPKLAELLRALGKVDIPWIRIHYAYPTGLTD
KVIKAMAETPNVLPYLDLPLQHSHPDILKAMNRPWQGKVNDGIIDRIKLALPNAIMRTTF
IVGFPGETQQNFDHLLQFVKRHQFDHVGVFTFSPEEGTKAYELGDQVPEEIKQARRNQLM
EVQQPIAAKKNEAEVGKLVPVLIEQENPMTGELIGRSPRFAPEVDGLVYVQGVADLGSIT
SVRITSADVYDLYGEIEIN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggcaataagccaaccatcgccgtttctcacttaggatgcgaaaaaaatcggattgat
tctgaacatatgctcggattactagcacgatcgggctacccaatagataataccgaagaa
ttagccgattatgttattgttaatacctgtagttttatagaatctgctcgtcaagaatcc
gttagaactttagtagaattagcagaaaaccagaaaaaaattattatctctggttgcatg
gcacagcattttcaagaagaattattagcagaattacctgaagctgtggctttagttggt
acgggtgactaccaaaatattgtcgaaattattgaacgagtagaaacaggggaaagggta
aaagcggtttcggcggaaccaacttttatcgcagatgagaatatcccccgttatcgcacg
acttccgaaggagtggcttatcttagggttgcagagggttgtgattatcgttgtgcattc
tgcattattcctcacttacgaggaaatcaacgatcgcgcaccattgaatctattgtcaaa
gaagcacaacaattagccgatgaaggagtaaaagaattaatcttaatctctcaaatcacc
actaattacggcgttgacttatacggtgaaccgaaattagcggaattattacgagctttg
ggcaaagtagatattccttggattagaatccattatgcttaccctacggggttgacggat
aaagttatcaaagcgatggctgagactcccaatgtattgccctatttagacttaccccta
caacattctcatcctgatattttaaaagccatgaatcgcccttggcaaggcaaggttaac
gatggaattatcgatcgtattaaactagctttaccgaatgctatcatgcgaaccactttt
attgtgggatttccgggagaaacgcaacaaaacttcgatcatttgttacaatttgttaaa
aggcatcaatttgatcatgtgggtgtgtttacattttctcccgaagaaggaacaaaggct
tatgaattaggcgatcaagttcccgaagagataaaacaagctcgtcgaaatcagttaatg
gaagtacaacaacccatcgccgcgaaaaaaaatgaagcggaagttggtaaacttgttccc
gtattaattgagcaagaaaatcccatgacaggagaattgattggtcgttcacctcgtttt
gccccggaagtagatggtttagtctatgttcaaggtgtagcagatctaggttcaataaca
tcagtcaggattacttccgccgatgtctatgatctctatggtgaaattgagataaattag
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