Geminocystis sp. NIES-3709: GM3709_1597
Help
Entry
GM3709_1597 CDS
T04142
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gen
Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gen03400
]
GM3709_1597
DNA repair and recombination proteins [BR:
gen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GM3709_1597
Archaeal homologous recombinant proteins
GM3709_1597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_15
AAA_27
AAA_29
AAA_21
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAQ64832
UniProt:
A0A0D6APP5
LinkDB
All DBs
Position
complement(1772516..1775533)
Genome browser
AA seq
1005 aa
AA seq
DB search
MIPRKLTLKNFLSYRSTNLDFNGLHTACICGANGAGKSSLLEAITWVVWGKTRTVSDDDI
IHLGEKNTRVDFEFIYNKEYYRIIRTRQRKGSGTLDFQIVSSNGYKSLSGKGLKDTQDNI
LNCLKIDYDTFINSAYLRQGRADEFMLRKPAERKKILADLLKLEQYEKLAESAKDSAKQY
KIRSEEIARNLEDILSQLEEKQAINLELENTEKDLQYLQLKEEEKSIKLKEINLLHSQRD
SLHDRVLWQRNQLDNIIQRIKTLETEKMGVDEEINKLNIILEQKSIITEKYQDLQDLRVE
DQQLNDRFQIYQNLLTKKQKLEENLREESNNLILNIQKEKTNLENLIKQQEELEKIVIKT
GDLTTEIQALKMCRERLKQLDEIQKDIVPFLQQQQNLKTALERELAKLEMELERIKQEEM
NLHVKLAEVPKKRQDFFNLEKQLKELENKKNYQKRVQEKGESQKSLIEIYLNNQKTIEKQ
IEKLHQKLDILNQDHAVCPLCDRELDDNHLTHVIMKTREEEKQLESESWHYKTEKRNCER
ELEKLRLEYGKLNQELVNENILKQSYIKLENQLDSIEDIYNQYEKNQAEKEKLTQLLTSG
NYAPEIQQQLLEIQNTIESFNYNEKDHALLRQEESNLRKVEYQQLKIKDVQNDLNKLLKR
KPELDNKINELELEFKKLTENSSLQLKINEINREIQEINYDSNYHQNIRQNLQQLQSYEF
QYLQLQEGKKQHPQLEKKLQQLTTNLDNYQQEKLTTETELKAIEEQLSSLKDYSLELQTL
QQQWEQYRKNIDDLFRKKGGLEQSLATLKDREKDRLKLEKILEECQKNYRIYQELSIAFG
KNGIQSLMIENILPQLETEANNLLARLTGSQLHVQFLTQKPKARSSKSASLKDTLDIIIA
DSQGTRSYETYSGGEAFRINFAIRLAISRILAQRSGTPLQLLIVDEGFGTQDSEGCDRLI
AALNAIAEDFACILTVTHMPQFKEAFQTRIEVYKTEEGSKIRLST
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgattccgagaaagttaacccttaaaaatttcttaagttatcgatcgacaaatctagat
tttaatgggcttcacactgcctgtatttgtggtgcaaatggtgccggaaaatcatctctt
ttagaggctattacttgggttgtttggggtaaaactcgtaccgttagtgatgatgatatt
attcatttaggagagaaaaatacaagggtggactttgagtttatttataataaagaatat
tatcgtattattcgtactcgtcagcgtaagggaagtgggactttagattttcaaattgtt
agtagtaatggttataaatctttatcaggaaaaggtttaaaagatacccaagataacatt
ttaaattgtttgaaaatagactatgatacctttattaattctgcttatttaagacaaggt
agagccgatgaatttatgttgcgaaaaccagcagaaagaaaaaaaattttagcggattta
ttaaaattagaacaatacgaaaaattggcagaatcagcaaaagattcagctaaacaatat
aaaattagaagtgaagaaatagctcgaaatttagaagatattttaagtcaactagaagaa
aaacaagctataaacttagaattagaaaatactgaaaaagatttacaatatcttcagctt
aaggaagaagaaaaatctattaaacttaaagaaattaatttacttcatagtcaaagagat
tcattgcatgatcgagtattatggcaaaggaatcaattggataatattattcaacgtatc
aagactttagaaacggaaaaaatgggcgttgatgaggagattaataagttaaatattatc
ctcgaacaaaaaagtattatcacggaaaaatatcaagacttacaagatttaagagttgaa
gatcagcagttaaacgatcgatttcaaatttatcagaatttgttgactaaaaaacagaaa
ttagaagaaaatttaagggaagaaagtaataacttaattcttaatattcaaaaagaaaaa
actaaccttgaaaacttaatcaaacaacaggaagaactagaaaaaattgttataaaaaca
ggagatttaacaacagaaattcaagccctaaaaatgtgtcgagaaagattaaaacaatta
gatgagatacaaaaagatattgtaccttttttacaacaacaacaaaatttgaaaactgct
ttagaaagagagttagcaaaattagaaatggaattagaaagaattaaacaggaggaaatg
aatttacacgtaaaattagcagaagttcccaaaaaaagacaagatttttttaacttagaa
aaacaacttaaagaattagaaaataaaaaaaattatcaaaaaagagtccaagaaaaagga
gaaagtcaaaaaagtttaattgaaatttatttgaataatcaaaaaactattgaaaaacaa
atagaaaaattacatcaaaaacttgatattttaaatcaagatcatgctgtgtgtccattg
tgcgatcgagaattagacgacaatcatttaactcatgtaatcatgaaaacaagagaagaa
gaaaaacagttagaatcagaatcttggcattataaaacagaaaaaagaaactgtgaaaga
gagttagaaaaattaaggcttgagtacggaaaattaaatcaagaattagtcaatgaaaat
attttaaaacaaagttatattaaattagaaaatcaattagattccattgaagatatatat
aatcaatatgagaaaaatcaagcagaaaaagaaaagttaacacagttattaactagcggt
aattatgctccagaaattcaacaacaattattagaaattcaaaacacgatcgaatccttt
aattataatgagaaagatcatgctttattaagacaagaagaatcaaatttaagaaaagta
gaatatcaacagttaaaaataaaagatgtccagaatgacttaaataaattattgaaacga
aaaccagaattagataacaaaatcaatgagttagaattagagtttaaaaaacttactgaa
aattcttctttacaattaaaaattaatgaaattaacagggaaattcaagagattaattat
gatagtaattatcatcaaaatattcgacaaaatttacaacaattacaatcttatgaattt
caatatttacaattacaagaaggaaaaaaacaacatcctcaattagagaaaaagttacaa
caattaaccactaatttagacaactatcaacaagaaaaattaactaccgaaacagagtta
aaagctattgaagaacagttatcttctttgaaagattatagtttagagttacagacttta
cagcaacaatgggaacaatatcgcaaaaatattgatgatttatttagaaaaaaaggtggt
ttagagcagtctttagctactttaaaagatagagaaaaagatcgactaaaactagaaaaa
attttagaagaatgtcagaaaaactatagaatttatcaggaattaagtatcgcttttggc
aaaaacggtattcagtctttgatgattgaaaatattttacctcagctagaaacagaagca
aataatcttttagctcgtttgacaggaagtcagttacatgttcaatttttaacccaaaaa
ccgaaagcccgaagcagtaaatctgcttctttgaaagatactttagatattatcatagcc
gatagtcaaggaactcgatcgtacgaaacttattctggtggtgaggcatttcgcatcaat
tttgccattcgtttagcaatatcccgcattttagcccaaagatctggcactcccttacaa
ttactcattgtagatgaaggttttggtactcaagacagcgaaggatgcgatcgtcttatt
gccgctttaaacgccattgcggaagacttcgcttgtatattgaccgtaactcatatgcct
caatttaaagaggcatttcaaacaagaatcgaggtatataaaaccgaagaaggctcaaaa
attagactttctacctaa
DBGET
integrated database retrieval system
